ChangeLog

Coalispr-0.9.6 (Jan, 2026)

Second public release.

Inclusion of a GUI (built with Tcl/Tk; start with coalispr_gui) to compose and run the same commands as via the CLI.

Refactoring of counting, now based around collections.Counter (replacing pandas.DataFrame). This gives a massive speed increase.

Multiprocessing used for counting and loading of bedgraph data (on linux).

Hand-cursor indicates interactive elements on interface of coalispr showgraphs.

Bin-analysis more refined and possibly more informative.

coalispr groupcompare refactored.

Counts for reads linked to extrageneous DNA (CHRXTRA) are now kept apart so that these do not inflate genomic counts.

A category for additional chromosomal DNA (ADD_GDNA) - that first was taken as extra DNA - is now included to enable inclusion into genomic counts.

Tested and developed with Python 3.12

Coalispr-0.7.8 (Oct, 2024)

First public release.

H99 and Mouse data @ https://doi.org/10.5281/zenodo.12822543

Tested and developed with Python 3.9