coalispr.resources.share.cols_from_csv_to_tab

Script to extract columns from csv for constructing a tabbed tsv file.

Attributes

mouse

yeast

h99

jec21

tutorials

Functions

load_list(infile, tutorial)

load_file(infile, tutorial, expandfile)

Script to help constructing an EXPFILE for tutorials

main(args)

Module Contents

coalispr.resources.share.cols_from_csv_to_tab.mouse
coalispr.resources.share.cols_from_csv_to_tab.yeast
coalispr.resources.share.cols_from_csv_to_tab.h99
coalispr.resources.share.cols_from_csv_to_tab.jec21
coalispr.resources.share.cols_from_csv_to_tab.tutorials
coalispr.resources.share.cols_from_csv_to_tab.load_list(infile, tutorial)
coalispr.resources.share.cols_from_csv_to_tab.load_file(infile, tutorial, expandfile)

Script to help constructing an EXPFILE for tutorials

Parameters:

  • file (str) – Input file with extension ‘.csv’, or ‘.txt’ to retrieve columns from.

  • tutorial (int) – Option to set tutorial for EXP.

  • expandfile (str) – File with extension ‘.csv’, or ‘.txt’ to add retrieved columns to.

coalispr.resources.share.cols_from_csv_to_tab.main(args)