Nuclear RNase P¶

Nuclear-RNase-P-as-CNAG_12260
Traces from siRNA libraries for H99 [Burke-2019], JEC21 [GSE178393] and RNA-Seq libraries [Wallace-2020] show expression of the ncRNA; signals for specific and unspecific siRNA samples are shown.

C. neoformans

../../_images/rnasep-cnag12260_h99_igb.png

Classified as belonging to Rfam family Nuclear RNase P (RF00009)

From a spliced transcript, with three exons
exon 1

>AE017343.1:1386538-1386548 Cryptococcus neoformans var. neoformans JEC21 chromosome 3 sequence
CAAACCCACAG

exon 2

>AE017343.1:1386601-1386644 Cryptococcus neoformans var. neoformans JEC21 chromosome 3 sequence
CAGCTCCAAGGTCACATTGCTCGTTACGCACAGTCGGGTGTTTT

exon 3

>AE017343.1:1386698-1387170 Cryptococcus neoformans var. neoformans JEC21 chromosome 3 sequence
TCAAAGCATCCTTACCCATTCGCGAGCGGGCCAAGGTCCTGGAATTCCAACCCCCCTTTCTTGCATATTA
TTATCAAGTCTGACCGGTCTTAGCGGACCCTCGACGCCAATCGCCGAGCTGCGCCCGACCAGAAATGCGT
CCCTCTTCTTTCAACCTCGTTGGGTAGCCCGGAGAGACGCTTTTTCGCGTGGAGGGTATGTGAGAACTGT
ATTGGACTTGGTATGGGCGCGGGGGGTCGCCTTGTAGCCTTTCGTTTCTCCAGCACTCCTGCGTTATGCG
GGGTATGAGAAGTCTCGTCTCATCATCGTTTGAGAACTGAGAAGCGTTGGTCTTTTAAGACTGACCCGGC
TGCAAGGCTTTAGTGCAATTTGGTGACGCTCTCAATTCAAACTCGTCTTCAATCGATGGCGAGGAGGGTA
ACTCGATCAGGACTACTCTGGGGCTGCGGGTATGGCTCTCGTGAGCCTAGATT

Image source RNAseP-alignment:

# STOCKHOLM 1.0
NuclearRNaseP/1-525          --CAAACCCACAG---CTCCAAGGTCACATTGCTCGTTACGCACAGTCGGGTGTTTT--------------------TCAAAGCATCCTTACCCATTCGCGAGCGGGCCAAGGTCCTGGAATTCCAACCCCC--CTTTCTTGCATA---------TTAT-----------TAT-CAAGTCTG--ACCGGTCTT-----AGCGGACCCTCGACG---------CCAATCGCCGAGCTGCGCCCGACCAGAAATGCGTCCCTCTTCTTTCAACCTCGT---------------------------------------TGGGTAGCCCGGAGAGACGCTT-----------------------------------TTTCGCGTGGAGGGTATG-TGAGAACTGTATT---GGACTTGGTATGGGCGCGG-GGGGTCGCCTT-GTAGCCTTT-CGTTTCTCCAGCACTCCTGCGTTATGCGGGG-TATGAGAAGT-CTCGTCTCATCATCGTTTGAGAACTGAGAAGCGTTGGTCTTTT---------------AAGACTGACCCGGCTGC---AAGGCTTTAGTGCAATTTGGTGACGCTCTCAATT-----CAAACTCGT--CTTCAATCG---------------ATGGCGA---GGAGGGTAACTCGATCAGGACTACTCTGGGGCTGCGGGT------ATGGCTC---TCGT---GAGCCTAGATT
from-CNAG12260/1-522         --CAAACCCACAG---CTCCAAGGTCACATTGCTCGTTACGCACAGTCAGGTGTCTT--------------------TCAAAGCATCCTTTCTTATTCGCGAGCGGGCCAAGGTCCTGGAATTCCAACCCCC--TTTTCTTGCATA---------TTAT-----------TAT-CAAGTCTG--ACCGGTCTT-----AGCGGACCCTCGACG---------CCAATCGCCGAGCTGCGCCCGACCAGAAATGCGTCCCTCTTCTTTCAACCTCGT---------------------------------------TGGGTAGCCCGGAGATACGCTT-----------------------------------TTTCGCGTGGAGGGTATG-TGAGAACTGTATT---GGACTTGGTATGGGCGCGG-GGGGTCGCCTT-GTAGCCTTT-TGTTTCTCCAGCACTCCTGCATTCTGCGGGG-TATGAGAAGT-CTCGCCTCATC---GTATGAGAATCGAGAAGCGTCGGTCTTTT---------------AAGACTGACCCGGCTAC---AAGACTTTAGTGCAATTTGGTGACGCTCTCAATG-----TAAACTCGT--CTTTAATCG---------------ATGGCGA---GGAGGGTAACTCGATCAGGACTACTCTGGGGCTGGGGGG------ATGGCTC---TCTT---GAGCCTAGATT
R265/1-525                   --CAAACCCACAG---CTCCAAGGTCACATTGCTCGTTACGCACAGTCAGGTGTTTT--------------------CTAAAGCGTCCTTTCTCACTCGCGAGCGGGCCAAGGTCCTGGAATTCCAACCCCC--CTTTCTTGCATA---------TTAT-----------TAT-CAAGTCTG--ACCGGTCTT-----AGCGGACCCTCGACG---------CCAATCGCCGAGCTGCGCCCGACCAGAAATGCGTCACTCTTCTTTCAACCTTGC---------------------------------------TGGGTAGCCCGGAGAGACGCTT-----------------------------------TTTCGCGTGGAGGGTATG-TGAGAATTGTATT---GGACTTGGTATGGGCGCGG-GGGGTTGCCTA-GTTGTCTTT-TGTTTCTTCAGCACCCCTGCATTCTGCGGGG-TATGAGAAGT-CTCATCTCATCATCGTATGAGAATCGAGAAGCGTTGGTCTTTT---------------AAGACTGACCCGGCTAC---TAGGCTTTAGTGCAATTTGGTGACGCTCTCAATC-----TAAACTCGT--TTTCAATCG---------------ATGGCGA---GGAGGGTAACTCGATCAGGACTACTCTGGGGCTGCGGGT------ATGGCTC---TCTT---GAGCCTAGATT
VanFra/1-459                 ----CCACCGCAG---GCCCAAGGTCACAATGCTCGCAACGCACGCGGCGTCTCTTG------------------------CGCGCCC--A--CACTCGCGAGCGGGCTAAGGTCCTGGCATTCAAACCCCC------T-----------------TC-------------------A------ACCGGCCTC----AAAGGG-CCC-GCG-----------CATCATG-CGCGTCGCGGTCGACCAGAAATGCGTCGCGACAGCCTTCCTTCAGG--------------------------------------------AGCCCAGAGACGCGTTT----------------------------GGCGTCTGCCAGCGCAGAGGGTATAGGTTGTCGTC-------GG-CTTGGTAGGAGCGCGG-GGG-TCGCCTC-GTGTTTCGT-CGTCGTGCGCGA------GGGTTACCTCGCG---TGCTTCG-----GTCCCTTT-GCTTTTGAGCAGATGGGATGTGCCCGCTTT------------------GACGGGCCCGGACACAA-GAGGCTTTAGTGCAATTTGGTGACGTCC--------CACAAACCGCGT-------GCTG---------------AACGCGAG-----GGATAACTCGATCAGGACTACTCTGGGTCTGCGGG------CATGGCTT----TC----GAGCCTAGATT
NaeEnc/1-470                 --CAACCCAGCAG---CTCCAAGGTCACAATGCTCGTCACGAACTGAGAGATGATTCAATT-----CATTCTCTTTTTTTTTGTTAATCTTAAATCTCACGAGCGGGTTAAGGTCCTGGTATTTTAACCCC-------C--------------AACTTCCC----------------G------ACCGATCTT----AAATAGATCCTAGG-----------CCAACAGCCTAGCAGCGCTCGACCAGAAATGCGTCCTTTTTCGTTCTCTCAAC-----------------------------------------------CCCGGAGAAGCGGTT-------------------------------TCTAGAAATCGTGGAGGGCAAAAAAAAACCGGAAAA--GTGATTTGGTAAGAGTGTGG-GGGGTAGCCTC-GTGTT---------TGCAAAACAGAGTGACATCCCACGA-----GGGAAAGTC--CGC----------------------------------------------------------ACACGTAAAAACAAAAAGGCTTTAGTGCAATTTGGTGACATCTTCATTT--TTCAAAAC---------TCGTCGATCCTTT--------AGAGAGATGAGGAAGATAACTCGATCAGGACTACTCTGGGGCTGCTGG------TATGGCTC----TC----GAGCCTAGATT
NaeAur/1-532                 --CGCCACCACTG---CTCCAAGGTCACAATGCTCGTCACGAACCGAGACGCTCCGGCT-----------CGCTCGCTCGCGTCGCCGTCTCCCACTCACGAGCGGGTTAAGGTCCTGGTATTCCAGCCCC-------CA----------------TC------------------TG------ACCGATCCC----AAACGGATCCTTGG-----------CCAACCGCCTCGCAGCGCCCGACCAGAAATGCGTCCCTCGTCCGTCCCACCTGC------------------AGAAGCGCCTTGTCAGTGCCCCCGTCAATGTGGAGATGTCTATGTGGATGTCTCAATGTCGATGTTGGCCC---TGACGAGGGCGTGGAGGACATGCGGAAC--------GAGGGACTTGGTATGGGCGTGG-GGGGCTGCCTC-GTGTCGCCGCGACCCCGACCCCTCGAGAGCCGGCATCCCAACTCGGGTTGCCC--CGCC----------TTGCGATGTGGTCGGCGTCCG---------------------------CACACGCA------AAGGCTTTAGTGCAATTTGGTGACGTCTTCA-------CCCAACC---------CGTCGATCC-----------AGAGAGACGGGGAAGACAACTCGATCAGGACTACTCTGGGGCTGCTGG------TATGGCTC----TC----GAGCCTAGATT
CryWin/1-497                 ---CATCCCGCAG---CTTCAAGGTCACAATGCTCGTCACGAACGCAGAGGCTGGAGCG---------------------TCCAGCCCTCTCCTCCTCGCGAGCGGGCCAAGGTCCTGGAATTCCAATCCCCC-----T---------------TTCTTC-----------------A------CCCGAAGTCT---GACCGGTCTTAGCGGACCCTCGACGCCAACCGCCGAGCCGTGCCCGACCAGAAATGCGTCCCCGCCTCACCATCTTTC---------------------------------AGATACCCGGAGAAGCTCTAGATGA---------------------------------------------GCGGAGGGCACGTGGGGATGG--------GGACTTGGTAGGGGTACGG-GGGGTCGCCTTTGTAGTATCACCGTT-TTCCTTCTTG---------GAAAGTCCAGATTCGAGCTCTGACT-------------------CGGACTCGGATGTGTCTCTCTACCCTGCCCAGGGATTGAGACCCGGCTAC---AAGGCTTTAGTGCAATTTGGTGACGCTCTCT---------CAACTCCT------CGTCTCTTCC----------ATGGCGAGGAGGAGGGTAACTCGATCAGGACTACTCTGGGGCTGCAGGA-----CATGGCT----TTAC----AGCCTAGATT
SaiJCM/1-494                 --AACATCAGCAG---CTCCAAGGTCACAATGCTCGCTACACACAGAGGAGCGCCCTAG----------------------CGCGCCCCCTCCCATTTGCGAGCGGGCTAAGGTCCTGGAATTCCAACCCCCA-----C----------------AAA-------------------G------ACTGGTCCTT----ACCGGATCCTCGG-----------CCAATCGTCGAGTAGTGCCCGACCAGAAATGCGTCCTCGTCCTGTCCCAACCTC------------------------------------CTCGAGGTGACCC--AGAGATGC------------------------------------GCAGAGCGCGGAGGGTATGGTGGGCGGC--------GGACTTGGTATGGGTGCGG-GGGGTCGCCTT-GTGTC-----CGTGTTCTTCCCTCGTCGTGGTCTCACGCA----GGGAGAGTCCCCGCTTCGGCGGGGAAGTGTCGTGGAGAAGCC-----------------------------ATGACCCGGATACCAAAAGGCTTTAGTGCAATTTGGTGACGTCCTCGGCCGGCTC-----TCGCTGTGCAACCCG-CCCTT---------GATGCGGCGGGGAGGATAACTCGATCAGGACTACTCTGGGACTGCTGGTGTTCCTATGGCTC----TC----GGGCCTAGATT
CutOle/1-389                 --CTCTCATGCAG---GCCCAAGGTCACAATGCTCGCCCCGAACGGCTC--------------------------------------CGGCCCCCCTCGCGAGCGGGATAAGGTCCTGGCATT-CGACCCCCA----------------------CCA--------------------------CCCGGCCC------AAAGGCCGCGCGCG----------TCATGCG-CG-GC-GCCCTCGACCAGAAATGCGCTGTGCGC--------------------------------------------------CGGACGACTCCCGGAGACGC---GGACCCGGCCTAGGCCT-------------------GGGCGAGCTGAGGG--CCGGCGCGC-----------GGCTTGGTAGGAGGGCGG-GGGAT-GCCT-------------------------GGCGTCCTGAGG--CGCGTCTCGAGAGAGCACGCG---------------------------------------------------------------CCCGGCGTC-AAGGCTTTAGTGCAATTTGGTGACGTCCCCA----------------------CTCACCCTCGGC---------GCTGCCGAGGGG-GGATAACTCGATCAGGACTACTCTGGGCCTGCT---------ATCGCTC----TC----GAGCGTAGATT
TriGra/1-414                 ---CCCTACGCAG---GCCCAAGGTCACAATGCTCGCAACAAACGGTAC----------------------------------CCACATACCCCCCTCGCGAGCGGGCTAAGGTCCTGGCCTTCCAACTCCC------ACC-------------CACGC----------------GGT-----CACCGGTCTC-----AGCGGACCTGCG------------TCTAAAGACGTACAGTGCTCGACCAGAAATTCGGCGCGCGCGCCGCGT---------------------------------------------------TCCCGGAGATGCTCGTCGCGCGGCCAGCACGC------------------GCGGCGAGCGGAGGG----GGCGCGCACC--------GCCTTGGTATGAGCGCGG-GAG-TCGCCC--GTGC-------------------GCGCGGAGCAG---------------------------------------------------------------------------CCCCCGCGGCTGTTCCCCACACGCGGCTTTAGTGCAATTTGGTGACGTCTCCGCCGCAAGGCAAACC--------GCTGCTCCCGG--------------CAGCAGGG-GGATAACTCGATCAGGACTACTCTGGGCCTGCG-----TCC--TGGCTC----TCT---GAGCCTAGATT
ApiDom/1-396                 ---CTCTACGCAG---GCCCAAGGTCACAATGCTCGCCACGCCCGGCTTTCCACA----------------------------------GCCACTCTCGCGAGCGGGCTAAGGTCCTGGCCTTCCAACTCCCC----------------------ACA--------------------------ACCGGCCCC-----AAAGGGCCAGCA------------TCTCACGGTGCTCAGCGTTCGACCAGCAATGCGCGGCGGTGGCCATTCAAATC----------------------------------------CCAGAGACGCCGAATAGGTAGA--------------------------------------GGGGGCCAGCGCC---------------------GCTTGGCACGAGCGCGG-GAG-TCGCCCC-GGGCGCGCATCTCTGAATATGGTACAGTTTCCTGTAAACTGTA----------------------------------------------------------------------------CCCGGCCCGG----GGCTTTAGTGCAATTTGGTGACGTCCCCTTTTTCAACCGCTGCGAAGTCGCAGT---------------------------GGGGGGATAACTCGATCAGGACTACTCTGGGCCTGCG---------ATGGCTT----TC----GAGCCTAGATT
ApiBra/1-373                 ----CTCACGCAG---GCCCAAGGTCACAATGCTCGCCACGCCCGGTAT-------------------------------------CCCACCACACTCGCGAGCGGGCTAAGGTCCTGGCATTCAAACTCCC------ACCGA------------TTAC--------------TCGGT-----CACCGGTCTC-----AGCGGACCTGCG------------TGTAACG-CGCACAGCGTTCGACCAGAAATGCGCTGC--CCCACCCA------------------------------------------------TAAATCC-AGAGATGCGTTA-------------------------------------TGCGGAGGAGGGTGGTGTT---------------AGCTTGGCACGAGCGCGG-GAG-TCGCC-----------------------------------------ACCAGTCGAGAGCTTTATGAG------------------------------------------------------------CCCGCTGGTT----GGCTTTAGTGCAATTTGGTGACGTCCTC--------ACAACTGGCAGTTTACAAC---------------------TGCTGGGG-GGATAACTCGATCAGGACTACTCTGGGCCTGCG-----TC--ATGGCTT----TC----GAGCCTAGATT
TreMes/1-504                 -CATCACCAGCAG---TCCCAAGGTCACATGGCTCGTTACAAACTGGGGTAT-------------------------------CACACCCCTACACTCACGAGCGGG--AAGGTCCTGGAATTCCAACCCCC------CATTTTGTTCG-------TT----------TGAACAAATG----TACAAGACCC------AAAGGTCTCCCA------------TTTAACGATGGGTATCGCTCGACCAGAAATGCGTCTACCCCTGACGCTCATCCAGCACCCGTAGAAACG-TCTTTTTTTCCCCTTCCTCAACTTGCACTCCCCTGCTCGTTGAGGAAG--GAGAGTGAAAA------------------------CGTGGAGGGCATGTCGGGGGATC------AGGACTTGGCATGAGCGTGG-GGG-TCGTCAA-GTGTGTTTTTCGTATTCAGCGGT-------------------------------------------------------------------------------------CCGACTCGAGATCCACACACGATT-GACTTTAGTGCAATTTGGTGACGTCTTTTCTTCCTCCTTTCCAAGAGGGAACGGTGGTTTTT--------TTTTTTACGACCGAAAGATAACTCGATCAGGACTACTCTGGGACTGCTGG---TC--ATGGCT---CTCTGT---AGCCTAGATT
KwoDej/1-572                 --CGATAATGCAG---TCTCAAGGTCACAATGCTCGTTACGAACCGGATGGATTGAGCCT----------------TTCCTCAAGCCCATTCACACTCGCGAGCGGGCCAAGGTCCTGGAATTTCAACTCC--CCTTTCTTTCTC----------CTTT-----------GGGGAAAGTCTGG--CCGATCTT-----AGCGGATCCTTGAATGATTA------TTTGTCAAGTTAATTCCCGACCAGAAATGCGTCCTTCCTGACTTT----------------------------GCTCCGCCCTCAAAAGCAGAGCAAGCCCGGAGAAGCGTC------------------------------TTCGCGTGGAGGGTATAGTCAGGTCCAATATAATC------GGACTTGGTATGGGAATGGTGGGGTCGCCTTATATCGTTGTTCCCCTACCCTTTTCTTCAGGAAAAGGAAAAGGGAGTCTCAGATGTTCTACATACAGGAGAAGCGTTGGTCTAATTTCCCTTATGAGGATTAT-----------GGCCAACCCCGATAGATAAAGGCTTTAGTGCAATTTGGTGACGTCCTCTTGTACCTTGTACGTCCCTCTATCTTAAG---------------ATGATGGGACGA-GGATAACTCGATCAGGACTACTCTGGGACTGCGGGG-TCAATATGGCTT---TTAC---AAGCCTAGATT
KwoPin/1-588                 AAACCCCTCGCAG---CTTCAAGGTCACAATGCTCGTTACGTACAAAAGTGAATTGATTATTT----GTTTTTAATCAATTTCATTTTAAAAAATCTCACGAGCGGGCCAAGGTCCTGGAATTTTAACCCCC--CTTTCATTTTTTTTATATAT-TATAT-ATATATATAAAAAAATGTTTG--ACCGATCTT-----AGCGGATCATTAGGAAATTAAATTATTCATTCAAAATTGTTCCCGACCAGAAATGCGTCCTTTCCT----------------------------ACTTTGTTTTTTCTATTTAAGAAAAAACAACCCATAGAAGCGTATTT-------------------------------------GCGTGGAGGGTATAAGTTGGTTTTT---GAAGGACTTGGTATGGGAATGGTGGGGTCGCCTTATATCGTTGTTTCCTTTTTTTGAAGGAAGTCTCTTAGAATAAAATAAAAGAGAA---------------------------------------------GCGTTGATAAATATAATCAACCCCGATATAT-AAAGGCTTTAGTGCAATTTGGTGACGTCCTCTTTTCTTTTTTTTTGAAGAAAAATCTTTTTTTATCTTTAGATAAAAAATTGG-ATGAGGATAACTCGATCAGGACTACTCTGGGACTGCGGGGGTAAATATGGCT---TTTCAT---AGCCTAGATT
KocImp/1-525                 AACCCTCCGGCAG---TCTCAAGGACACAATGCTTGCCAACGAACAAAGAGACGATATG---------------ATTCAGTATCGCTCTCTCTACCTTGCAAGCGGGTTAAGGTCCTGGAATTTCAACTCTT------CCCGATGGT--------GCG-----------ACCTTTGGGTCGTC-CACGGACCGATCCTAGCTGGATCCTAGTGTTAATCATCTTTTACACCTAGAACCGCTCGACAAGAAATGCGTTGGCCCCATATGACCACTC----------------------------------------AACCCGACC-TGAGAAGTCAT-CGAGTGCCCATTTTGG---------------GCACCTAGTGATGGAGGTATAGTATGGGGATAC-------AACATGGTATGAGCGGGGAAGAGTCGCTTTTGGTCTTTTGGCCCAGTGTTTGGGCTCTGGCCCGAAACTGCGGCTACGTTGCGCATGGCGTGG---------------------------------------------------------CGGGAGACAGCAGAGGCTTTAGTGCAATTTGGTGACGTCCCTTTTC---------------------------ATAAGCTGTCTGCTCTGGCAACAGTGGGATAACTCGATCAGGACTACTCTGAGACTGCCCGAGGT---ATGGCCA---GTT----TGGCCTAGATT
PapLau/1-473                 --CACCCCAGCAG---CTCCAAGGTCACAATGCTCGTCACAGACAAGAGACTTG-------------------------------CTCTCTTCCACTCGCGAGCGGGCTAAGGTCCTGGAATTCAAACCCC-------A----------------TTT-------------------T-----AACCGGTCCT----AAACGGATCCTCG------------CTTCACAGCGTGTCCCGCTCGACCAGAAATGCGTC------------------------------------GTCGGTCTCTCTTCCGGTCACCCGGGAAGCCCGGAGAAGCGCCCAG--------------------------------------CGCGGAGGGTACAGAGGCCGCTC--------GACTTGGTATGGGCGTGA-GGGGTCGCCTC-GTGTCCCGTCTCTCGCGTCTGTTACAGACGCAGAGGTCTCATTAGCAGAAGTGTCTGGGGGATATATATATATCCCCC--------------------------------------AGACCCGGACATCTAGAGGCTTTAGTGCAATTTGGTGACGTCTCTGTACAACTTGTCGG---------------AACCATGGTCC---------GACAAGGGAGATAACTCGATCAGGACTACTCTGGAGCTGCTGGG--TCACATGGCC---TCTTC----GGCCTAGATT
CrySki/1-549                 ---CATCACACCA---CGCCCATCTGTCCATGCGCTAACTCATTAATTC------------------------------AGGATACCCCCTCACCCTCAACCGTGGG--AAGGTCCTGGAATTTTAACCCTC------G----------------CCT-------------------C------ACCGATCCTC----ACCGGATCCTCG------------AGTAACGTCGAGCACCGTCCGACCAGAAATGCGTCTCGTCCCATCCTTCCCCTCCCCA----------------------CTTCCTTGCTCTACATTTTCATCGGTGTAGACTTGTGGGGTCGGGAAATCTCTG------AGAAGCTGGAGACAGTAGAGAGAATGATGGGATT----------GAGACTTGGTAGGGACGTGG-AGGGTTGCCTTGTTTCCTCTTTTTTTTCGTTCGTTTCTCCCCATCGATGATGGGTCTTCCCGTCTCTGGGGGTAACGAGTTTTGTTGGCTTGTTTCGACGGCTACAAAAAGTGTCAACGCCAAGAGCTTGACCCGGAAAT-GAAAGGCTTTAGTGCAATTTGGTGACGTCGTTTG--------------------------ATAACCCTTCGTCGCCTTGGCGGAGGGGACGACAACTCGATCAGGACTCTTCTGGGGCTGCTGGGG-TC--ATGGCTC----TC----GAGCCTAGATT
CryFla/1-541                 ---CGCCCAGCAG---CTCCAAGGTCACAATGCTCGTCACAGACAAGAGACGCACGGTT----------CCTCACAGCCGCGCCGCTCTCTCCCACTCGCGAGCGGGCTAAGGTCCTGGTATTCAAACCCCTA-----CTA-CGAG---------TCA------------CTCGATAG-----AACCGGTCCT----AAACGG-ACTCCAGG----------TCTAACGACCTGTCCCACCCGACCAGAAACGCGCCGTCCGCTCT-------------------------------------------------GTGACCACCCGGAGAAGCGTCCCGTTGCTGCAT---------------ACGCGCGGCTAGGGCGCGGAGGGGAGAGCT-----------GGGCCGCTTGGCAAGGGTGTG-CGGGGTCGCCTCGCGTCTTGTCCTCGTCTCGTCGGCTTTGGCCACGGGCGATTGGGTCT-GCAAGCAGATGTTGTCTGGCGATTGCGGT----------------------------CGCCGGACCCAG--------ACGTCGAGAGGCTTTAGTGCAATTTGGTGACGTCTCTGGCTGTCGCGCTGCGAGGTGCGGCAGCAATCGCCGGCGCGCTCTCGTGGCGGCGAGGAGATAACTCGATCAGGACTACTCTGGGGCTGCTGGGTG--CAATGGCC----TCTC----GGCCTAGATT
PapTer/1-545                 --CGTCCCGGCAG---CTCCAAGGTCACAATGCTCGTCACAGACCAGAGACGTGCGGCT----------------CGCCGTCACGCTCTCTCCCATTCGCGAGCGGGCTAAGGTCCTGGAATTCAAACCCCTA-----CTATT------------AC----------------GATAG-----AACCGGTCCT----AAACGG-ACTCCAGG----------TCTAACGACCTGTCCCACCCGACCAGAAACGCGCCGTCCGCTCT-------------------------------------------------TAGTGTACCCGGAGAAGCGTCTTGCTCTTCCG--TGCGCCATGCCGGAGTCTGTGAGCGGGACGTGGAGGGAAGAGCGCC---------AGACCGCTTGGCAAGGGTGTG-CGGGGTCGCCTCGCGTCTTGTCCCCGTTCTCCTGGCTTTGGCCGGGGACGGTTGGGTCTCATTCGCAGATGTTGTCTGGCTACTGCGGT----------------------------CGCCAGAACCAG--------ACGTCGAGAGGCTTTAGTGCAATTTGGTGACGTCTCCGGCTGCTGCGCTGCGAGGTGCGGCAGCAATCGTCGGTGCGCT-TGGTATCGGCGAGGAGATAACTCGATCAGGACTACTCTGGGGCTGCTGGG--CCAAATGGCC----TCTC----GGCCTAGATT
TreFuc/1-443                 --CAACCCAGCAG---CGCCAAGGTCACATGGCTCGTCACACACGCGGAGCA---------------------------AGACGCGCTCCTCCACTCATCGAGCGGG--AAGGTCCTGGAATTTCAACCCCC------C----------------TAC-------------------G------ACAGTACCT-----AAAGGTACACCCAGA---------TAAACCGCTGGGCGCGACTCGACCAGAAATGCGTCCCTCCCC------------------------------------------GACCGGCCTCGGCCAACCCGGAGATGCGACCCCCC------------------------TTTTCGGAGGGGCGCGGAGGGCATGTCGGGTGTT------GGGGACTTGGTATGAGCGCGG--GGGTCGCCGGTGGTTATTTCGTGGACTGTCTGTCTCATGGACGGATGG---------------------------------------------------------------------------------TCCCGCCATC----AGGCTTTAGTGCAATTTGGTGACGTCTCATAT---------------------------ACTGTTTCGTCCTTTCGACGAGAGAGGAGACAACTCGATCAGGACTACTCTGGCGCTGCTGGG-TACCCATGGCCT-CTCTACCC-AGGCCTAGATT
DioAur/1-397                 ----CAACAGCAG---TCCCAAGGTCACAATGCTCGAAACACACAGAGAGGGGTAGGC---------------ATCACAGCCAACATCTCTCACACTCTCGAGCGGGCTAAGGTCCTGGAATTTCAACC---------CT---------------CATCA----------------AG------ACTGGTCCT----AAACGGATCCTCGAC-----------TAAGCATCGAGCAGCGTCCGACCAGAAATGCGGTCCCT--------------------------------------------------GTCGTCTTGAGTCCGGAGAAGCGCTCT--------------------------------------GCGTGGAGGGCATGGCGATCGC--------GGACCTTGGCATGGGCGCGG-AGGGTTGCCTCATGCTGAATGGTGTCTT---------------------------------------------------------------------------------------------------CAGGCCCAAGCATCAAGAGGCTTTAGTGCAATTTGGTGACGTTCCT--------------------------------------ACACTGTGCTTTGGCCAGGGGATAACTCGATCAGGACTACTCTGGGTCTGCTGTTGT----ATGGCC----TTT-----GGCCTAGATT
//

Source unspliced alignment:

# STOCKHOLM 1.0
Annot/1-39                                   ------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGrGT------------------------------------------------------------------------------------------------------------------------------------------------------CTGA--------------YAG----------------------------------------------------GTGrGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGA------------------------------------YAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGrGT-------------------------------------------------------CTGA-------------YAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
#=GS NuclearRNaseP-as-CNAG12260/1-593 DE spliced 3 exons
NuclearRNaseP-as-CNAG12260/1-593             ------------------------------------------------------------------------------------------------------------------------------------------------------CAAACCCACAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCAAGGTCACATTGCTCGTTACGCACAGTCGGGTGTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAAGCATCCTTACCCATTCGCGAGCGGGCCAAGGTCCTGGAATTCCAACCCCCCTTTCTT-------------------GCATATTATTATCAAGTCTGACCGGTCTT-----AGCGGACCCTCGACG---------CCAATCGCCGAGCTGCGCCCGACCAGAAATGCGTCCCTCTTCTTTCAACCTCGT--------------------------------------------------------------------------------------------------------------------------TGGGTAGCCCGGAGAGACGCTT-----------------------------------TTTCGCGTGGAGGGTATG-TGAGAACTGTATT---GGACTTGGTATGGGCGCGG-GGGGTCGCCTT-GTAGCCTTT-CGTTTCTCCAGCACTCCTGCGTTATGCGGGG-TATGAGAAGT-CTCGTCTCATCATCGTTTGAGAACTGAGAAGCGTTGGTCTTTT---------------AAGACTGACCCGGCTGC---AAGGCTTTAGTGCAATTTGGTGACGCTCTCAATT-----CAAACTCGT--CTTCAATCG---------------ATGGCGA---GGAGGGTAACTCGATCAGGACTACTCTGGGGCTGCGGGT------ATGGCTCTCGT----GAGCCTAGATTTTT-ATATTTATCAAACATATTTAATACCATTATTT-CTGGGATGCATTTTCAAACCTCGAGAAGAGATA
#=GS pre-NuclearRNaseP-as-CNAG12260/1-717 DE ncRNA 3:1386521:1387238:1
pre-NuclearRNaseP-as-CNAG12260/1-717         ------------------------------------------------------------------------------------------------------------------------------------CTTCTTTCCCTTTCTT--CAAACCCACAG-GTAAGTGTCTGTCGCGCCCAGTCTCAGCTTGTCGCTCACAGTGCCGCATGC--------------------------------------------------------------------------------------------------------------------------GCAG---CTCCAAGGTCACATTGCTCGTTACGCACAGTCGGGTGTTTT--------GTGAGTCCCTGTCTCTCAAACGTGCACTTTGAAAGCCC--------------------------------------------------------------------------------------------------------------------------------------------------CTGACAATC----------------------------TTGTAG--------------TCAAAGCATCCTTACCCATTCGCGAGCGGGCCAAGGTCCTGGAATTCCAACCCCCCTTTCTT-------------------GCATATTATTATCAAGTCTGACCGGTCTT-----AGCGGACCCTCGACG---------CCAATCGCCGAGCTGCGCCCGACCAGAAATGCGTCCCTCTTCTTTCAACCTCGT--------------------------------------------------------------------------------------------------------------------------TGGGTAGCCCGGAGAGACGCTT-----------------------------------TTTCGCGTGGAGGGTATG-TGAGAACTGTATT---GGACTTGGTATGGGCGCGG-GGGGTCGCCTT-GTAGCCTTT-CGTTTCTCCAGCACTCCTGCGTTATGCGGGG-TATGAGAAGT-CTCGTCTCATCATCGTTTGAGAACTGAGAAGCGTTGGTCTTTT---------------AAGACTGACCCGGCTGC---AAGGCTTTAGTGCAATTTGGTGACGCTCTCAATT-----CAAACTCGT--CTTCAATCG---------------ATGGCGA---GGAGGGTAACTCGATCAGGACTACTCTGGGGCTGCGGGT------ATGGCTCTCGT----GAGCCTAGATTTTT-ATATTTATCAAACATATTTAATACCATTATTT-CTGGGATGCATTTTCAAACCTCGAGAAGAGATA
#=GS H99/1-734 DE CP003822.1:c636640-635907 Cryptococcus neoformans var. grubii H99 chromosome 3, complete sequence
H99/1-734                                    ---------------------------------------------------------------------------------------------------------------CTTTGAGTTTTATTTTTCTTTCTTCTTTCCCTTTCTT--CAAACCCACAG-GTAAGTATCCGTCATGCTCAGCCCCAGTTTGTCGCTCACGATAGCGCTTGTT--------------------------------------------------------------------------------------------------------------------------CAG---CTCCAAGGTCACATTGCTCGTTACGCACAGTCAGGTGTCTT--------GTGAGTTCCTGTCTCTCAAATGTGCACTTTGAAAACCT--------------------------------------------------------------------------------------------------------------------------------------------------CTGACAATC----------------------------TTGTAG--------------TCAAAGCATCCTTTCTTATTCGCGAGCGGGCCAAGGTCCTGGAATTCCAACCCCCTTTTCTT-------------------GCATATTATTATCAAGTCTGACCGGTCTT-----AGCGGACCCTCGACG---------CCAATCGCCGAGCTGCGCCCGACCAGAAATGCGTCCCTCTTCTTTCAACCTCGT--------------------------------------------------------------------------------------------------------------------------TGGGTAGCCCGGAGATACGCTT-----------------------------------TTTCGCGTGGAGGGTATG-TGAGAACTGTATT---GGACTTGGTATGGGCGCGG-GGGGTCGCCTT-GTAGCCTTT-TGTTTCTCCAGCACTCCTGCATTCTGCGGGG-TATGAGAAGT-CTCGCCTCATC---GTATGAGAATCGAGAAGCGTCGGTCTTTT---------------AAGACTGACCCGGCTAC---AAGACTTTAGTGCAATTTGGTGACGCTCTCAATG-----TAAACTCGT--CTTTAATCG---------------ATGGCGA---GGAGGGTAACTCGATCAGGACTACTCTGGGGCTGGGGGG------ATGGCTCTCTT----GAGCCTAGATTTTT-AAATTTATCAAATATTTTTAGTGCCATTATTTTCTGGGATGCATTTTCAGACCTCGGGAAGAGA--
#=GS R265/1-734 DE CP025759.1:1587683-1588416 Cryptococcus gattii VGII R265 chromosome 1, complete sequence
R265/1-734                                   ---------------------------------------------------------------------------------------------------------------CTTCGAGTTTTATTTTTCTTTCTTCTTTCCCTTTCTT--CAAACCCACAG-GTGAGTATCTGTCTCCCTCAGTCCCAGCTCGTCGCTCACAGTGCCGATTTTC--------------------------------------------------------------------------------------------------------------------------CAG---CTCCAAGGTCACATTGCTCGTTACGCACAGTCAGGTGTTTT--------GTGAGTTCCGGTCTCTCT-GTGCGTACTTTGAAAGCCC--------------------------------------------------------------------------------------------------------------------------------------------------CTGACAATA-----------------------------TGTAG--------------CTAAAGCGTCCTTTCTCACTCGCGAGCGGGCCAAGGTCCTGGAATTCCAACCCCCCTTTCTT-------------------GCATATTATTATCAAGTCTGACCGGTCTT-----AGCGGACCCTCGACG---------CCAATCGCCGAGCTGCGCCCGACCAGAAATGCGTCACTCTTCTTTCAACCTTGC--------------------------------------------------------------------------------------------------------------------------TGGGTAGCCCGGAGAGACGCTT-----------------------------------TTTCGCGTGGAGGGTATG-TGAGAATTGTATT---GGACTTGGTATGGGCGCGG-GGGGTTGCCTA-GTTGTCTTT-TGTTTCTTCAGCACCCCTGCATTCTGCGGGG-TATGAGAAGT-CTCATCTCATCATCGTATGAGAATCGAGAAGCGTTGGTCTTTT---------------AAGACTGACCCGGCTAC---TAGGCTTTAGTGCAATTTGGTGACGCTCTCAATC-----TAAACTCGT--TTTCAATCG---------------ATGGCGA---GGAGGGTAACTCGATCAGGACTACTCTGGGGCTGCGGGT------ATGGCTCTCTT----GAGCCTAGATTTTTTATACTTTACACATATTTTTTACCATTATTCTGGAATGCATTTTCAGAACTTGGGAAGAGATA----
#=GS VanFra/1-620 DE BEDY01000003.1:1711800-1712595 Vanrija fragicola DNA, scaffold: scaffold_3, strain: JCM 1530, whole genome shotgun sequence
VanFra/1-620                                 TAGATTCTGGTAGCGTCACTACTTTTATGCCACGTGCCGCAAATCGCCATGGCTGTTGTGACATAACGCCGGTTTTATTTCCGGGTGCGAGTGCCGCAAGCGGTGTGCTGAATA-----CTTCTCATCTCGGATCCCAGTGTTGCTCT----CCACCGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAAGGTCACAATGCTCGCAACGCACGCGGCGTCTCTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCGCCC--A--CACTCGCGAGCGGGCTAAGGTCCTGGCATTCAAACCCC------------------------------------------CTTCAACCGGCCTC----AAAGGG-CCC-GCG-----------C-ATCATGCGCGTCGCGGTCGACCAGAAATGCGTCGCGACAGCCTTCCTTCAGG-------------------------------------------------------------------------------------------------------------------------------AGCCCAGAGACGCGTTT----------------------------GGCGTCTGCCAGCGCAGAGGGTATAGGTTGTCGTC-------GG-CTTGGTAGGAGCGCGG-GGG-TCGCCTC-GTGTTTCGT-CGTCGTGCGCGA------GGGTTACCTCGCG---TGCTTCG-----GTCCCTTT-GCTTTTGAGCAGATGGGATGTGCCCGCTTT------------------GACGGGCCCGGACACAA-GAGGCTTTAGTGCAATTTGGTGACGTCC--------CACAAACCGCGT-------GCTG---------------AACGCGAG-----GGATAACTCGATCAGGACTACTCTGGGTCTGCGGG------CATGGCTTTC------GAGCCTAGATTTTTTCATCTTTTGGAGGA----------------------------------------------------
#=GS NaeEnc/1-681 DE MCFC01000026.1:203163-203843 Naematelia encephala strain 68-887.2 BCR39scaffold_26, whole genome shotgun sequence
NaeEnc/1-681                                 ----------------------------------------------------------------------------------------------------------------------------------TTTCTCTTCTTCTTCTTC--CAACCCAGCAG-GTAAGTAACAAAGATTCCACTCGTATCTTCTACCACCACCCCAACCCTCTACCACTGCCTATTACCTCTTACTCAGTCTCCATCCCCTATTTCCCTTCGTATTT------------------------------------------------AATACTGATATCCAACCCTCTTTAG---CTCCAAGGTCACAATGCTCGTCACGAACTGAGAGATGATTCAATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTCTCTTTTTTTTTGTTAATCTTAAATCTCACGAGCGGGTTAAGGTCCTGGTATTTTAACCCCCA-------------------------------------ACTTCCCGACCGATCTT----AAATAGATCCTAGG-----------CCAACAGCCTAGCAGCGCTCGACCAGAAATGCGTCCTTTTTCGTTCTCTCAAC----------------------------------------------------------------------------------------------------------------------------------CCCGGAGAAGCGGTT-------------------------------TCTAGAAATCGTGGAGGGCAAAAAAAAACCGGAAAA--GTGATTTGGTAAGAGTGTGG-GGGGTAGCCTC-GTGTT---------TGCAAAACAGAGTGACATCCCACGA-----GGGAAAGTC--CGC----------------------------------------------------------ACACGTAAAAACAAAAAGGCTTTAGTGCAATTTGGTGACATCTTCATTT--TTCAAAAC---------TCGTCGATCCTTT--------AGAGAGATGAGGAAGATAACTCGATCAGGACTACTCTGGGGCTGCTGG------TATGGCTCTC------GAGCCTAGATTTTCTTTTATTCTCATTTACATGCATGACATGTCTCTCATTAGCGTTCCCATCTTGTTCTCTTGC------
#=GS NaeAur/1-766 DE JAKFAO010000008.1:849662-850431 Naematelia aurantialba strain NX-20 Contig8, whole genome shotgun sequence
NaeAur/1-766                                 -------------------------------------------------------------------------------------------GTCTCTCCCTGTCCCTGTCCCCGCTCCTCCTCCCTCTCGCCTCCTCCTATCCTCTTC--CGCCACCACTG-GCTCGTGCGCGCA-----------------------------------------------------------------------------------------------------------------------------------------------CTGACCACCT--------CAG---CTCCAAGGTCACAATGCTCGTCACGAACCGAGACGCTCCGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTCGCTCGCGTCGCCGTCTCCCACTCACGAGCGGGTTAAGGTCCTGGTATTCCAGCCCCCA-----------------------------------------TCTGACCGATCCC----AAACGGATCCTTGG-----------CCAACCGCCTCGCAGCGCCCGACCAGAAATGCGTCCCTCGTCCGTCCCACCTGC----------------GTGTGCGTGTACTTTACATGTACATGTACATGTGCATGTACGTGTACGTGTGCATGCACAGCGTAGGGGATGGGAATTCAG----AGAAGCGCCTTGTCAGTGCCCCCGTCAATGTGGAGATGTCTATGTGGATGTCTCAATGTCGATGTTGGCCC---TGACGAGGGCGTGGAGGACATGCGGAAC--------GAGGGACTTGGTATGGGCGTGG-GGGGCTGCCTC-GTGTCGCCGCGACCCCGACCCCTCGAGAGCCGGCATCCCAACTCGGGTTGCCC--CGCC----------TTGCGATGTGGTCGGCGTCCG---------------------------CACACGCA------AAGGCTTTAGTGCAATTTGGTGACGTCTTCA-------CCCAACC---------CGTCGATCC-----------AGAGAGACGGGGAAGACAACTCGATCAGGACTACTCTGGGGCTGCTGG------TATGGCTCTC------GAGCCTAGATTTTCTTACTACTCTGACAGTCATCGCATGCATGCCATGCATCGCGTTGTTCCTACATCGAGTATCGTCATG
#=GS CryWin/1-678 DE CP034262.1:218558-219281 Cryptococcus wingfieldii strain CBS7118 chromosome 2, complete sequence
CryWin/1-678                                 CGAAAACAGGTCTCTCATGAAATTTCAGCAAGTCGACCGGCGGCGGCGCAAGAGAAGATGGACGGCTTACTTAATATTACATAAGCAGCCAAAACGCCGCCAATTTCCGCCCCGCTGTCAAAACAACATTCCTCGTCTCTTTCTTCTC---CATCCCGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCAAGGTCACAATGCTCGTCACGAACGCAGAGGCTGGAGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAGCCCTCTCCTCCTCGCGAGCGGGCCAAGGTCCTGGAATTCCAATCCCCCTTTCTT-------------------------------------CACCCGAAGTCT---GACCGGTCTTAGCGGACCCTCGACGCCAACCGCCGAGCCGTGCCCGACCAGAAATGCGTCCCCGCCTCACCATCTTTC--------------------------------------------------------------------------------------------------------------------AGATACCCGGAGAAGCTCTAGATGA---------------------------------------------GCGGAGGGCACGTGGGGATGG--------GGACTTGGTAGGGGTACGG-GGGGTCGCCTTTGTAGTATCACCGTT-TTCCTTCTTG---------GAAAGTCCAGATTCGAGCTCTGACT-------------------CGGACTCGGATGTGTCTCTCTACCCTGCCCAGGGATTGAGACCCGGCTAC---AAGGCTTTAGTGCAATTTGGTGACGCTCTCT---------CAACTCCT------CGTCTCTTCC----------ATGGCGAGGAGGAGGGTAACTCGATCAGGACTACTCTGGGGCTGCAGGA-----CATGGCTTTAC------AGCCTAGATTTTTTGTATTGTTTTCTAGTCATGCCATGAACAA-------------------------------------
#=GS SaiJCM/1-714 DE BCLC01000007.1:c23400-22687 Saitozyma sp. JCM 24511 DNA, scaffold_6, whole genome shotgun sequence
SaiJCM/1-714                                 --------------------------------------------------------------------------------------------------------------AACGGCATCAATGACCAGTCGTGTCTCGTTTCTTCTTC--AACATCAGCAG-GTGGGTCGACTCGCTTGCCATTGTCCCTCA---------------------------------------------------------------------------------------------------------------------CGCCCCAAGCTGACACGCTCT-----GCAG---CTCCAAGGTCACAATGCTCGCTACACACAGAGGAGCGCCCTAG------GTATGTCCCATGCCCTCGGCATCCATGTCACGCCGCCAT-----------------------------------------------------------------------------------------------------------------------------------------------CGCTGACTCTTG---------------------------TTGAAG------------------CGCGCCCCCTCCCATTTGCGAGCGGGCTAAGGTCCTGGAATTCCAACCCCCA----------------------------------------CAAAGACTGGTCCTT----ACCGGATCCTCGG-----------CCAATCGTCGAGTAGTGCCCGACCAGAAATGCGTCCTCGTCCTGTCCCAACCTC-----------------------------------------------------------------------------------------------------------------------CTCGAGGTGACCC--AGAGATGC------------------------------------GCAGAGCGCGGAGGGTATGGTGGGCGGC--------GGACTTGGTATGGGTGCGG-GGGGTCGCCTT-GTGTC-----CGTGTTCTTCCCTCGTCGTGGTCTCACGCA----GGGAGAGTCCCCGCTTCGGCGGGGAAGTGTCGTGGAGAAGCC-----------------------------ATGACCCGGATACCAAAAGGCTTTAGTGCAATTTGGTGACGTCCTCGGCCGGCTC-----TCGCTGTGCAACCCG-CCCTT---------GATGCGGCGGGGAGGATAACTCGATCAGGACTACTCTGGGACTGCTGGTGTTCCTATGGCTCTC------GGGCCTAGATTACTCGTCGATGCATAGCCATCCACTTCGCGATTCGCTGAACACACTATCTAAGGGGTATCCCGCAATCTC
#=GS CutOle/1-542 DE QKWL01000003.1:c1217149-1216528 Cutaneotrichosporon oleaginosum strain ATCC 20508 ATCC20508_contig03, whole genome shotgun sequence
CutOle/1-542                                 TCCCATCCGACTCAGTGGACAACCTCCACCGAACCTCCACCTCCACCTCCACCTCCACCAGTGCCACCGGCAAACCCCGAAACGCCGCGCACAGTCCCCCCCCACCCCGTCCCCTCGCCGCCGTCATAATTTCCATTCATCTTCCTTC--CTCTCATGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAAGGTCACAATGCTCGCCCCGAACGGCTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCCCCCCTCGCGAGCGGGATAAGGTCCTGGCATT-CGACCCCCA------------------------------------------CCACCCGGCCC------AAAGGCCGCGCGCG----------TCATGCG-CG-GC-GCCCTCGACCAGAAATGCGCTGTGCGC-------------------------------------------------------------------------------------------------------------------------------------CGGACGACTCCCGGAGACGC---GGACCCGGCCTAGGCCT-------------------GGGCGAGCTGAGGG--CCGGCGCGC-----------GGCTTGGTAGGAGGGCGG-GGGAT-GCCT-------------------------GGCGTCCTGAGG--CGCGTCTCGAGAGAGCACGCG---------------------------------------------------------------CCCGGCGTC-AAGGCTTTAGTGCAATTTGGTGACGTCCCCA----------------------CTCACCCTCGGC---------GCTGCCGAGGGG-GGATAACTCGATCAGGACTACTCTGGGCCTGCTA----TC-----GCTCTC------GAGCGTAGATTTTCCA-----------------------------------------------------------------
#=GS TriGra/1-575 DE BCJO01000005.1:1898900-1899489 Trichosporon gracile DNA, scaffold: scaffold_4, strain: JCM 10018, whole genome shotgun sequence
TriGra/1-575                                 AGCTCTGAAAAGGGTGCCACATGCAAACACGTGGCCTTTACTGACTTCCATATTTCCGAAATGCCGCGAGTGCGAAGCCAGGCCCTTGGGGAAGCTGGCTGTATTTATACTTCTGACGTCCA-TCTCTGGTTTGAACTTTCTTTTTCT---CCCTACGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAAGGTCACAATGCTCGCAACAAACGGTAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACATACCCCCCTCGCGAGCGGGCTAAGGTCCTGGCCTTCCAACTCCCA---------------------------------CCCACGCGGTC-ACCGGTCTC-----AGCGGACCTGCG------------TCTAAAGACGTACAGTGCTCGACCAGAAATTCGGCGCGCGCGCCGCGT--------------------------------------------------------------------------------------------------------------------------------------TCCCGGAGATGCTCGTCGCGCGGCCAGCACGC------------------GCGGCGAGCGGAGGG----GGCGCGCACC--------GCCTTGGTATGAGCGCGG-GAG-TCGCCC--GTGC-------------------GCGCGGAGCAG---------------------------------------------------------------------------CCCCCGCGGCTGTTCCCCACACGCGGCTTTAGTGCAATTTGGTGACGTCTCCGCCGCAAGGCAAACC--------GCTGCTCCCGG--------------CAGCAGGG-GGATAACTCGATCAGGACTACTCTGGGCCTGCG-----TCC--TGGCTCTCT-----GAGCCTAGATTTTTATATTACTCGT--------------------------------------------------------
#=GS ApiDom/1-563 DE BCFW01000004.1:118596-119158 Apiotrichum domesticum DNA, scaffold: scaffold_3, strain: JCM 9580, whole genome shotgun sequence
ApiDom/1-563                                 ----CGCCCATGGAATCCCCAAGCACTCGCCACACCTATAACCCCGAAATCCCGCCTACCTCCACCACGCCACCCCTCCCTTCGCCCCCTCGCGAGATTTCAATCCCATAAAACCACCCTACCCATTCCTCTTTCCTTTTTCCTCTTT---CTCTACGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAAGGTCACAATGCTCGCCACGCCCGGCTTTCCACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCACTCTCGCGAGCGGGCTAAGGTCCTGGCCTTCCAACTCCCCA------------------------------------------CAACCGGCCCC-----AAAGGGCCAGCA------------TCTCACGGTGCTCAGCGTTCGACCAGCAATGCGCGGCGGTGGCCATTCAAATC---------------------------------------------------------------------------------------------------------------------------CCAGAGACGCCGAATAGGTAGA--------------------------------------GGGGGCCAGCGCC---------------------GCTTGGCACGAGCGCGG-GAG-TCGCCCC-GGGCGCGCATCTCTGAATATGGTACAGTTTCCTGTAAACTGTA----------------------------------------------------------------------------CCCGGCCCGG----GGCTTTAGTGCAATTTGGTGACGTCCCCTTTTTCAACCGCTGCGAAGTCGCAGT---------------------------GGGGGGATAACTCGATCAGGACTACTCTGGGCCTGCG---------ATGGCTTTC------GAGCCTAGATTTTTCTCTATTCGTATGCGATGTA-----------------------------------------------
#=GS ApiBra/1-530 DE JAMALJ010000037.1:121100-121650 Apiotrichum brassicae strain M2204 ctg_37, whole genome shotgun sequence
ApiBra/1-530                                 TGGCGGAATCGCGCCACACAAGACAAACTACCATAATGCCGAAACTCCGAGTGTACTCATCCTCGCCCCAGTCCGGCGCACAGACCAGCTTGCTTCGCGCAGAAAACAAACAAATCGCAAAACCATTTTGTTTCTTTTTTTCTTTTTC----CTCACGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAAGGTCACAATGCTCGCCACGCCCGGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCACCACACTCGCGAGCGGGCTAAGGTCCTGGCATTCAAACTCCCA-------------------------------CCGATTACTCGGTCACCGGTCTC-----AGCGGACCTGCG------------TGTAACG-CGCACAGCGTTCGACCAGAAATGCGCTGC--CCCACCCA-----------------------------------------------------------------------------------------------------------------------------------TAAATCC-AGAGATGCGTTA-------------------------------------TGCGGAGGAGGGTGGTGTT---------------AGCTTGGCACGAGCGCGG-GAG-TCGCC-----------------------------------------ACCAGTCGAGAGCTTTATGAG------------------------------------------------------------CCCGCTGGTT----GGCTTTAGTGCAATTTGGTGACGTCCTC--------ACAACTGGCAGTTTACAAC---------------------TGCTGGGG-GGATAACTCGATCAGGACTACTCTGGGCCTGCG-----TC--ATGGCTTTC------GAGCCTAGATTTTTTTTTTT-------------------------------------------------------------
#=GS TreMes/1-857 DE AFVY01000040.1:67607-68463 Tremella mesenterica DSM 1558 strain Fries TREMEscaffold_1_Cont40, whole genome shotgun sequence
TreMes/1-857                                 ----------------------------------------------------------------------------------------------------------CTCTATTTAACGCTCAGTCGAAATGACCTCCTCTTTCTTCTC-CATCACCAGCAG-GCAAGTCGCTCCCTCTGATCCTCTCCACTCGATCTCCACTCGTACAGTAGGTAGGC------------------------------------------------------------------------------------------------AGAGCTGACTTGAA-------ACAG---TCCCAAGGTCACATGGCTCGTTACAAACTGGGGTAT-------------GTGAGTGATTTTCCATAACTCTTCACACCCCGTGATCTCCCCATTCGCATTCATACTCCATCCACCAAACCACATCATCGTCAATCACCCTTCAACCTCCAAATACTTTTCGCTCCATAACCATACACCAAAACATCCGTGGTTGATGACAAACGTATCTGCTGGTGCTCAGATGGCCCAGCGAATGACTCAGTGAAATCA-----------AATATTGACCTATAG--------------------CACACCCCTACACTCACGAGCGGG--AAGGTCCTGGAATTCCAACCCCCCA-TTTT-------------------GTTCGTTTGAACAAAT-GTACAAGACCC------AAAGGTCTCCCA------------TTTAACGATGGGTATCGCTCGACCAGAAATGCGTCTACCCCTGACGCTCATCCAGCACCCGTAGAAACG------------------------------------------------------------------------------------TCTTTTTTTCCCCTTCCTCAACTTGCACTCCCCTGCTCGTTGAGGAAG--GAGAGTGAAAA------------------------CGTGGAGGGCATGTCGGGGGATC------AGGACTTGGCATGAGCGTGG-GGG-TCGTCAA-GTGTGTTTTTCGTATTCAGCGGT-------------------------------------------------------------------------------------CCGACTCGAGATCCACACACGATT-GACTTTAGTGCAATTTGGTGACGTCTTTTCTTCCTCCTTTCCAAGAGGGAACGGTGGTTTTT--------TTTTTTACGACCGAAAGATAACTCGATCAGGACTACTCTGGGACTGCTGG---TC--ATGGCTCTCTGT----AGCCTAGATTTCTCTGTACTCTCATATCAAG-------------------------------------------------
#=GS KwoDej/1-832 DE ASCJ01000004.1:1569400-1570231 Kwoniella dejecticola CBS 10117 cont1.4, whole genome shotgun sequence
KwoDej/1-832                                 -----------------------------------------------------------------------------------------------------CCTCGACTGTGCCACTCGCAACTGATCATGCCCTGTGCTCTTTCTCC--CGATAATGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAAGGTCACAATGCTCGTTACGAACCGGATGGATTGAGCCT-----GTGAGTTGTTAGGTTCGAGTCGAGATATCCGTTTATCCCCTTATCCTCTTTGATATTCACTTCCCATAACCCCCC--TCGTACATGCTTTTACCTAAAACCCAGCTATCCCGTGCCAGTCTTTCTGCTTGCTC----------------------------------------GGGATTATGAGCTGATTGATCGGAGTC---------------TTAATCGCATAG-------------TTCCTCAAGCCCATTCACACTCGCGAGCGGGCCAAGGTCCTGGAATTTCAACTCCCCTTTCTT-------------------TCTCCTTTGGGGAAAGTCTGGCCGATCTT-----AGCGGATCCTTGAATGATTA------TTTGTCAAGTTAATTCCCGACCAGAAATGCGTCCTTCCTGACTTT---------------------------------------------------------------------------------------------------------------GCTCCGCCCTCAAAAGCAGAGCAAGCCCGGAGAAGCGTC------------------------------TTCGCGTGGAGGGTATAGTCAGGTCCAATATAATC------GGACTTGGTATGGGAATGGTGGGGTCGCCTTATATCGTTGTTCCCCTACCCTTTTCTTCAGGAAAAGGAAAAGGGAGTCTCAGATGTTCTACATACAGGAGAAGCGTTGGTCTAATTTCCCTTATGAGGATTAT-----------GGCCAACCCCGATAGATAAAGGCTTTAGTGCAATTTGGTGACGTCCTCTTGTACCTTGTACGTCCCTCTATCTTAAG---------------ATGATGGGACGA-GGATAACTCGATCAGGACTACTCTGGGACTGCGGGG-TCAATATGGCTTTTAC----AAGCCTAGATTTTTTGTATAATCCCATATTTGTCTTCAATTTGTACGCTTGGCA---------------------------
#=GS KwoPin/1-972 DE ASCL01000005.1:1462806-1463777 Kwoniella pini CBS 10737 cont1.5, whole genome shotgun sequence
KwoPin/1-972                                 -----------------ATTTCCGTCTTGACCTTTCTTGCCATGTGGTTTAATCGAGGTTTTTGGTTTCTGGTATCAATACTCATAACGTTGATTTTGATTTTTCAACTCTTTTTTATTGTTTTCTTTTTTCTTTCCTTTTAAGTGAAAAACCCCTCGCAG-GTGAGTGTAAAAGTATTCTCATTTCCTAAAAAACCCTACTTATACATAAATATGAAAATCGGTGTTCATCAATTGATTGTTTGTTTTCTTTTTCTT--------------------------------------------------TTGAAATTTTTTGATT----------CATAG---CTTCAAGGTCACAATGCTCGTTACGTACAAAAGTGAATTGATTATTT--GTAAGTTTTTTTTTTATTAATTTTCTCTTATAATTTTTTTCAAATTATATTCTTGTT----------------------------------------------------------------------------------------------------------------------------AATTGACTTTTCTTTTTTTTAAATATATTATATTCATAATTTATAG----GTTTTTAATCAATTTCATTTTAAAAAATCTCACGAGCGGGCCAAGGTCCTGGAATTTTAACCCCCCTTTCATTTTTTTTATATATTATATATATATATAAAAAAATGTTTGACCGATCTT-----AGCGGATCATTAGGAAATTAAATTATTCATTCAAAATTGTTCCCGACCAGAAATGCGTCCTTTCCT---------------------------------------------------------------------------------------------------------------ACTTTGTTTTTTCTATTTAAGAAAAAACAACCCATAGAAGCGTATTT-------------------------------------GCGTGGAGGGTATAAGTTGGTTTTT---GAAGGACTTGGTATGGGAATGGTGGGGTCGCCTTATATCGTTGTTTCCTTTTTTTGAAGGAAGTCTCTTAGAATAAAATAAAAGAGAA---------------------------------------------GCGTTGATAAATATAATCAACCCCGATATAT-AAAGGCTTTAGTGCAATTTGGTGACGTCCTCTTTTCTTTTTTTTTGAAGAAAAATCTTTTTTTATCTTTAGATAAAAAATTGG-ATGAGGATAACTCGATCAGGACTACTCTGGGACTGCGGGGGTAAATATGGCTTTTC----ATAGCCTAGATTTTTTCGTATTTATTGTATTTTGTATATTTTGTT-------------------------------------
#=GS KocImp/1-647 DE NBSH01000006.1:821674-822320 Kockovaella imperatae strain NRRL Y-17943 BD324scaffold_6, whole genome shotgun sequence
KocImp/1-647                                 ----------------------------------ACGATCACCTGAAACACGGTGGCATTCGGCGTTAACACTCATGTGGCACTTTTTGACCCATCCCTGAAACATGCTCATGTACACAATTTGGACCAGCGCATTTCTCTTCTTCTCAACCCTCCGGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAAGGACACAATGCTTGCCAACGAACAAAGAGACGATATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAGTATCGCTCTCTCTACCTTGCAAGCGGGTTAAGGTCCTGGAATTTCAACTCTTCCCGATG-------------------GTGCGACCTTTGGGTCGTCCACGGACCGATCCTAGCTGGATCCTAGTGTTAATCATC-TTTTACACCTAGAACCGCTCGACAAGAAATGCGTTGGCCCCATATGACCACTC---------------------------------------------------------------------------------------------------------------------------AACCCGACC-TGAGAAGTCAT-CGAGTGCCCATTTTGG---------------GCACCTAGTGATGGAGGTATAGTATGGGGATAC-------AACATGGTATGAGCGGGGAAGAGTCGCTTTTGGTCTTTTGGCCCAGTGTTTGGGCTCTGGCCCGAAACTGCGGCTACGTTGCGCATGGCGTGG---------------------------------------------------------CGGGAGACAGCAGAGGCTTTAGTGCAATTTGGTGACGTCCCTTTTC---------------------------ATAAGCTGTCTGCTCTGGCAACAGTGGGATAACTCGATCAGGACTACTCTGAGACTGCCCGAGGT---ATGGCC-AGTTT----GGCCTAGATTTTTGGTTA--------------------------------------------------------------
#=GS PapLau/1-638 DE JDSR01001115.1:c34021-33384 Papiliotrema laurentii RY1 contig_1154, whole genome shotgun sequence
PapLau/1-638                                 ----------------------------------------------------------------------------------------------------------------------CTCTGAGTGCGATACTCGACACTTTCTCTT--CACCCCAGCAG-GTAAGCATTCAATCTAAGACACGCTGGGCTTGAAA------------------------------------------------------------------------------------------------------------------------GCTGACATT----------CAG---CTCCAAGGTCACAATGCTCGTCACAGACAAGAGACTTG-----------GTGCGTTTCGCCGACACTTCCAC-----TAGGGGCACCCCCCAGCTCCGAGTAACACGC----------------------------------------------------------------------------------------------------------------------------GCTAATCT-------------------------------CTCAG----------------------CTCTCTTCCACTCGCGAGCGGGCTAAGGTCCTGGAATTCAAACCCCATTT-----------------------------------------TAACCGGTCCT----AAACGGATCCTCG------------CTTCACAGCGTGTCCCGCTCGACCAGAAATGCGTC-----------------------------------------------------------------------------------------------------------------------GTCGGTCTCTCTTCCGGTCACCCGGGAAGCCCGGAGAAGCGCCCAG--------------------------------------CGCGGAGGGTACAGAGGCCGCTC--------GACTTGGTATGGGCGTGA-GGGGTCGCCTC-GTGTCCCGTCTCTCGCGTCTGTTACAGACGCAGAGGTCTCATTAGCAGAAGTGTCTGGGGGATATATATATATCCCCC--------------------------------------AGACCCGGACATCTAGAGGCTTTAGTGCAATTTGGTGACGTCTCTGTACAACTTGTCGG---------------AACCATGGTCC---------GACAAGGGAGATAACTCGATCAGGACTACTCTGGAGCTGCTGGG--TCACATGGCCTCTTC-----GGCCTAGATTTCTGTACAAGCATGCAGACGT-------------------------------------------------
#=GS CrySki/1-650 DE BCHT01000012.1:77636-78285 Cryptococcus skinneri DNA, scaffold: scaffold_11, strain: JCM 9039, whole genome shotgun sequence
CrySki/1-650                                 ---------------------------------------------------------------CAGCTCCAAGGTCACAAAACGGTTCACGACCAGAGGGGCATCATTGTAAGTTTGTCCTCTATCCTCTATCCTTCCACCTCTCCTC-CATCACACCACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCATCTGTC-CA-TGCGCTAACTCATTAATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATACCCCCTCACCCTCAACCGTGGG--AAGGTCCTGGAATTTTAACCCTCG-----------------------------------------CCTCACCGATCCTC----ACCGGATCCTCG------------AGTAACGTCGAGCACCGTCCGACCAGAAATGCGTCTCGTCCCATCCTTCCCCTCCCCA---------------------------------------------------------------------------------------------------------CTTCCTTGCTCTACATTTTCATCGGTGTAGACTTGTGGGGTCGGGAAATCTCTG------AGAAGCTGGAGACAGTAGAGAGAATGATGGGATT----------GAGACTTGGTAGGGACGTGG-AGGGTTGCCTTGTTTCCTCTTTTTTTTCGTTCGTTTCTCCCCATCGATGATGGGTCTTCCCGTCTCTGGGGGTAACGAGTTTTGTTGGCTTGTTTCGACGGCTACAAAAAGTGTCAACGCCAAGAGCTTGACCCGGAAAT-GAAAGGCTTTAGTGCAATTTGGTGACGTCGTTTG--------------------------ATAACCCTTCGTCGCCTTGGCGGAGGGGACGACAACTCGATCAGGACTCTTCTGGGGCTGCTGGGG-TC--ATGGCTCTC------GAGCCTAGATTTTTGTAATCATGCATC------------------------------------------------------
#=GS CryFla/1-754 DE CAUG01000327.1:2767-3526 Cryptococcus flavescens NRRL Y-50378 WGS project CAUG00000000 data, contig NODE_558_length_88033_cov_44_204185, whole genome shotgun sequence
CryFla/1-754                                 GTCATAGCCCATTGTGACGTGTGACGTGGCGTTAACCCCTCGCACCCAACATACCTTATCAAAGCTCCACGCGCAAACTCCGCCCAATCCCGCCGCCCCGCGCACGTCCGCCAACTTTTGTTGTGCACCCATCATCCTACCCTCTCTT---CGCCCAGCAG-GTGAGTGACCATCACTTG-------------------------------------------------------------------------------------------------------------------------------CACACCTCCCACTGACCC-----------CAG---CTCCAAGGTCACAATGCTCGTCACAGACAAGAGACGCACGGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCACAGCCGCGCCGCTCTCTCCCACTCGCGAGCGGGCTAAGGTCCTGGTATTCAAACCCCTA--------------------------CTACGAGTCACTCGATAGAACCGGTCCT----AAACGG-ACTCCAGG----------TCTAACGACCTGTCCCACCCGACCAGAAACGCGCCGTCCGCTCT------------------------------------------------------------------------------------------------------------------------------------GTGACCACCCGGAGAAGCGTCCCGTTGCTGCAT---------------ACGCGCGGCTAGGGCGCGGAGGGGAGAGCT-----------GGGCCGCTTGGCAAGGGTGTG-CGGGGTCGCCTCGCGTCTTGTCCTCGTCTCGTCGGCTTTGGCCACGGGCGATTGGGTCT-GCAAGCAGATGTTGTCTGGCGATTGCGGT----------------------------CGCCGGACCCAG--------ACGTCGAGAGGCTTTAGTGCAATTTGGTGACGTCTCTGGCTGTCGCGCTGCGAGGTGCGGCAGCAATCGCCGGCGCGCTCTCGTGGCGGCGAGGAGATAACTCGATCAGGACTACTCTGGGGCTGCTGGGTG--CAATGGCCTCTC------GGCCTAGATTTATATACCAACGCGAAGAATTATGCA--------------------------------------------
#=GS PapTer/1-763 DE JAHXHD010000036.1:c19802-19040 Papiliotrema terrestris strain LS28 scaffold-35, whole genome shotgun sequence
PapTer/1-763                                 TATTCCGAAACACCTTGTCACAAAAGCACCACCACACAACGCGTTTCACCACATCCCATAACTCCGGTCAACCCCGCTGGCGCCCTCCCCCTCGCTCGCCGCTCTCGCCAACTTTTGTTGTCCGTCCGCTGCTTGATCTCCTCTTCTT--CGTCCCGGCAG-GTGAGTCTTAAAGTCAGCCATACCCGCGGCCC--------------------------------------------------------------------------------------------------------------------------AACTGACGC-----------CAG---CTCCAAGGTCACAATGCTCGTCACAGACCAGAGACGTGCGGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCGTCACGCTCTCTCCCATTCGCGAGCGGGCTAAGGTCCTGGAATTCAAACCCCTA--------------------------------CTATTACGATAGAACCGGTCCT----AAACGG-ACTCCAGG----------TCTAACGACCTGTCCCACCCGACCAGAAACGCGCCGTCCGCTCT------------------------------------------------------------------------------------------------------------------------------------TAGTGTACCCGGAGAAGCGTCTTGCTCTTCCG--TGCGCCATGCCGGAGTCTGTGAGCGGGACGTGGAGGGAAGAGCGCC---------AGACCGCTTGGCAAGGGTGTG-CGGGGTCGCCTCGCGTCTTGTCCCCGTTCTCCTGGCTTTGGCCGGGGACGGTTGGGTCTCATTCGCAGATGTTGTCTGGCTACTGCGGT----------------------------CGCCAGAACCAG--------ACGTCGAGAGGCTTTAGTGCAATTTGGTGACGTCTCCGGCTGCTGCGCTGCGAGGTGCGGCAGCAATCGTCGGTGCGCT-TGGTATCGGCGAGGAGATAACTCGATCAGGACTACTCTGGGGCTGCTGGG--CCAAATGGCCTCTC------GGCCTAGATTTATATACCAATGCAACGAGTGCAGTG--------------------------------------------
#=GS TreFuc/1-677 DE BRDD01000067.1:143619-144205 Tremella fuciformis NBRC 9317 DNA, KCNB80TF.67, whole genome shotgun sequence
TreFuc/1-677                                 -----------------------------------------------------------------------------------------------------------------------CTGTCGGTCGCGAGTTGCTTTCTCTTCTT--CAACCCAGCAG-GTAAGTCGAGCCGTCTCTCATGGTCCCAATCTGTCCCAGCTACAGCATGATCAGCATTCCTCTCTCTCCTCTCCTGGTATCCCTCGCACCAAAGAGACATCCTCGCCATCACCCGTTCTCCCATCTGGGCGAGACGATCACCTCTCATGACTCCAGCTGATCCC----------CAG---CGCCAAGGTCACATGGCTCGTCACACACGCGGAGCA-------------GTCTTCTATGCCTCACAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATCAG----------------AGACGCGCTCCTCCACTCATCGAGCGGG--AAGGTCCTGGAATTTCAACCCCCCTA-----------------------------------------CGACAGTACCT-----AAAGGTACACCCAGA---------TAAACCGCTGGGCGCGACTCGACCAGAAATGCGTCCCTCCCC-----------------------------------------------------------------------------------------------------------------------------GACCGGCCTCGGCCAACCCGGAGATGCGACCCCCC------------------------TTTTCGGAGGGGCGCGGAGGGCATGTCGGGTGTT------GGGGACTTGGTATGAGCGCGG--GGGTCGCCGGTGGTTATTTCGTGGACTGTCTGTCTCATGGACGGATGG---------------------------------------------------------------------------------TCCCGCCATC----AGGCTTTAGTGCAATTTGGTGACGTCTCATAT---------------------------ACTGTTTCGTCCTTTCGACGAGAGAGGAGACAACTCGATCAGGACTACTCTGGCGCTGCTGGG-TACCCATGGCCTCTCTACCCAGGCCTAGATTCTTCACATAGA-----------------------------------------------------------
#=GS DioAur/1-605 DE BCKN01000008.1:976280-976985 Dioszegia aurantiaca DNA, scaffold: scaffold_7, strain: JCM 2956, whole genome shotgun sequence
DioAur/1-605                                 CTCTTGGCGTTTGCATCTGTAGCATACAAAGCCTGAATTACAAATGGTGCACGTGACCGCCGTGCGTTAAAGCCGCAAATCGCCGCCGCCGCTGCGCCGCATACAATTTGGGCCAAATTCATCCAACCTCCCTCCTTCCATCATACTT----CAACAGCAG-GTAAGTTTCGAGGGTCCA-------------------------------------------------------------------------------------------------------------------------------TATAGCTCAAACTGACCCA----------TAG---TCCCAAGGTCACAATGCTCGAAACACACAGAGAGGGGTAGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCACAGCCAACATCTCTCACACTCTCGAGCGGGCTAAGGTCCTGGAATTTCAACCCTCAT----------------------------------------CAAGACTGGTCCT----AAACGGATCCTCGAC-----------TAAGCATCGAGCAGCGTCCGACCAGAAATGCGGTCCCT-------------------------------------------------------------------------------------------------------------------------------------GTCGTCTTGAGTCCGGAGAAGCGCTCT--------------------------------------GCGTGGAGGGCATGGCGATCGC--------GGACCTTGGCATGGGCGCGG-AGGGTTGCCTCATGCTGAATGGTGTCTT---------------------------------------------------------------------------------------------------CAGGCCCAAGCATCAAGAGGCTTTAGTGCAATTTGGTGACGTTCCT--------------------------------------ACACTGTGCTTTGGCCAGGGGATAACTCGATCAGGACTACTCTGGGTCTGCTGTTGT----ATGGCCTTT-------GGCCTAGATTATATGCATAGACACATCACG--------------------------------------------------
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