snR51_snR79

../../_images/snR51-snR79_h99_igb.png

  • snR51_snR79_intronic-boxCDsnoRNA-90nt-in-transcript-with-3-exons-for-HACAsnoRNAs

  • Within transcript with two exons, each coding for an HACAsnoRNA

  • Predicted target D’ guide in 25S rRNA: cagTgtgaata

  • Orthologue of yeast snR51 (D' guide), human SNORD41 (D guide)

  • Predicted target D guide in 18S rRNA: atacCgttgtagt

  • Orthologue of yeast snR79 (D guide)

  • In view of their irregularity, the assignment of D’ box as gcga and the C’ box as gcatgc is tentative

../../_images/snR51-snR79-align.png

>AE017348.1:c304059-303969 Cryptococcus neoformans var. neoformans JEC21 chromosome 8 sequence
ATCGTATGATGATACAACCTCCTAATCGTATTCACACTGTGCGACTCTTCGGAGCATGCGCGTAACCTTC
CTTACAACGGTATCTGATACT







  • Image source snR51_snR79:

# STOCKHOLM 1.0
#=GF RW van Nues, July 2023
#=GF https://coalispr.codeberg.page/paper
Annot/1-46                  -----RTGATGA------------------------------------AUAAGUGUGAC-CTGA----------RTGATGA---------------UGAUGUUGCCAUACTGA-----------------------
#=GS snR51_snR79/28-118 DE intronic-boxCDsnoRNA 90nt ncrna 8:303969:304059:-1 in transcript AE017348.1:c304553-303587 Cryptococcus neoformans var. neoformans JEC21 chromosome 8 sequence
snR51_snR79/28-118          ATCGTATGATGATA--CAACC----------------TCCTAATCG--TATTCACACTGTGCGACT-CTTCGG-AGCATGCGCGTAACCTTC----CTTACAACGGTATCTGATACT-------------------
#=GS H99/28-118 DE intronic-boxCDsnoRNA-90nt 14: [881,595 - 881,685] (+90) from transcript-with-ncRNAs-as-CNAG_05651 14: [881,099 - 882,066] (+967)
H99/28-118                  ATCGTATGATGATA--CAACC----------------TCCTAATCG--TATTCACACTGTGCGACT-CTTCGG-AGCATGCGCGTAACCTTC----CTTACAACGGTATCTGATACT-------------------
#=GS WM276/29-119 DE CP000297.1:774992-775955 Cryptococcus gattii WM276 chromosome L, complete sequence
WM276/29-119                ATCGTATGATGATA--CAACC----------------TCCTAATCG--TATTCACACTGTGCGACT-CTTCGG-AGCATGCGCGTAACCCTT----CTTACAACGGTATCTGATACT-------------------
#=GS R265/28-118 DE CP025768.1:770439-771405 Cryptococcus gattii VGII R265 chromosome 10, complete sequence
R265/28-118                 ATCGTATGATGATA--CAACC----------------TCCTAATCG--TATTCACACTGTGCGACT-CTTCGG-AGCATGCGCGTAACCCTT----CTTACAACGGTATCTGATACT-------------------
#=GS CryWin/19-111 DE CP034264.1:951319-952310 Cryptococcus wingfieldii strain CBS7118 chromosome 4, complete sequence
CryWin/19-111               TCACAATGATGAAA-CAAAAA----------------TTTTAATCG--TATTCACACTGTATAAC--CTTCGG--GAATGCACGCAACCTATTT-TTCTACAACGGTATCTGATACC-------------------
#=GS CryFlo/19-111 DE RRZH01000006.1:937000-937588 Cryptococcus floricola strain DSM 27421 chromosome 6, whole genome shotgun sequence
CryFlo/19-111               TCACAATGATGAAA-CAAAAA----------------TTTTAATCG--TATTCACACTGTATAAC--CTTCGG--GAATGCACGCAACCTATTT-TTCTACAACGGTATCTGATACC-------------------
#=GS CryAmy/19-111 DE MEKH01000004.1:c639260-638672 Cryptococcus amylolentus CBS 6273 supercont2.4, whole genome shotgun sequence
CryAmy/19-111               TTACAATGATGAAA-CAAAAA----------------TTTTAATCG--TATTCACACTGTATAAC--CTTCGG--GAATGCACGCAACCTATTT-TTCTACAACGGTATCTGATACC-------------------
#=GS KwoShan/28-119 DE NQVO01000005.1:266109-267155 Kwoniella shandongensis strain CBS 12478 scaffold00005, whole genome shotgun sequence
KwoShan/28-119              GAGCAATGACGAAAATCATTT----------------TCCTAATCG--TATTCACACTGTGCGACT-CTTCGG-AGAATGCGTATAACCA-----TCTTACAACGGTATCGGAGCTC-------------------
#=GS TreFuc/25-112 DE BRDD01000107.1:217708-217976 Tremella fuciformis NBRC 9317 DNA, KCNB80TF.107, whole genome shotgun sequence
TreFuc/25-112               TCGCGATGAAGAAG-CAAAAC----------------TTCTAATCGA-TATTCACACTGTGCGACT-CTTCGG-AGGATGCGCGT-ACAA-------CTTCAACGGTATCGGAGCG--------------------
#=GS TreTag/20-110 DE CAJHEQ010000099.1:c4138-3402 MAG: Tremellales sp. Tagirdzhanova-0007 genome assembly, contig: TREM_99, whole genome shotgun sequence
TreTag/20-110               GAGCTATGAAGAAGAACATTT----------------ATCTAATC---TATTCACACTGTGCGAATCCCTCGGGAGAATGGGCTTAACAA-------CTTCAACGGTATCGGAGCTC-------------------
#=GS CrySki/30-115 DE BCHT01000004.1:c997544-996802 Cryptococcus skinneri DNA, scaffold: scaffold_3, strain: JCM 9039, whole genome shotgun sequence
CrySki/30-115               GAGCTGTGATGACAAAAAACT----------------TTCTAATC---TATTCACACTGTGCTACTCCTTCGGGGGGATGCGTAT-ACA-----------CAACGGTAACTGAGCTC-------------------
#=GS NaeEnc/30-119 DE MCFC01000068.1:78283-79199 Naematelia encephala strain 68-887.2 BCR39scaffold_68, whole genome shotgun sequence
NaeEnc/30-119               GAGCCATGAAGAAAGAAAAGA----------------GTCTAATCG--TATTCACACTGTGTTACT-CTTCGG-AGGATGCGCTTACCAA-------CTTCAACGGTATCGGAGCTC-------------------
#=GS NaeAur/23-113 DE JAKFAO010000004.1:751858-752914 Naematelia aurantialba strain NX-20 Contig4, whole genome shotgun sequence
NaeAur/23-113               GAGCGATGAAGAAAAACAAGA----------------GTCTAATCG--TATTCACACTGTGCTACTCTACCCG-AGGATGCGCTTATCAA-------CTTCAACGGTATCGGAGCTC-------------------
#=GS TriInk/11-100 DE JXYM01000003.1:c2483108-2482763 Trichosporon inkin strain JCM 9195 scaffold_0003, whole genome shotgun sequence
TriInk/11-100               TTTTCATGATGATAAACACTC----------------TTCTAATCG--TATTCACACTGTGTTAC--CTTCGG--GAATGCACGCAAAAG-----CTTTACAACGGTATCTGATACC-------------------
#=GS TriAsa/10-99 DE JAMALY010000015.1:205888-206279 Trichosporon asahii strain Y3 ctg_15, whole genome shotgun sequence
TriAsa/10-99                TTTTCATGATGACAAAAACTC----------------TTCTAATCG--TATTCACACTGTGTTAC--CTTCGG--GAATGCACGCAAAAG-----CTTTACAACGGTATCTGATACC-------------------
#=GS TriOvo/5-94 DE WEIQ01000002.1:390175-390661 Trichosporon ovoides strain 2NF903A scaffold2-size1541096, whole genome shotgun sequence
TriOvo/5-94                 CTTCCATGATGAGAACCACTC----------------TTCTAATCG--TATTCACACTGTGTTAC--CTTCGG--GAATGCACGCAAAAG-----CTTTACAACGGTATCTGATACC-------------------
#=GS CryFla/16-103 DE CAUG01000665.1:c226167-225789 Cryptococcus flavescens NRRL Y-50378 WGS project CAUG00000000 data, contig NODE_2199_length_286162_cov_45_720577, whole genome shotgun sequence
CryFla/16-103               TGGCTATGAAGAAAAAAACTT----------------TCCTAATCG--TATTCACACTGTGTGAC--CTTCGG--GAATGCGCACACCAA-------CTTCAACGGTATCGGAGCCT-------------------
#=GS PapTer/16-103 DE JAHXHD010000244.1:1-462 Papiliotrema terrestris strain LS28 scaffold-243, whole genome shotgun sequence
PapTer/16-103               TGGCTATGAAGAAAAAAACTT----------------TCCTAATCG--TATTCACACTGTGTGAC--CTGCGG--GAATGCGCACACCAA-------CTTCAACGGTATCGGAGCCT-------------------
#=GS PapLau/7-96 DE JAAZPX010000010.1:c205857-205721 Papiliotrema laurentii strain IF7SW-F4 scaffold16_cov195, whole genome shotgun sequence
PapLau/7-96                 GGGCGATGAAGAAAAACACT-----------------TCCTAATCG--TATTCACACTGTGCTAG-CTCTCACGAGATTGCGCGCAAACA-------CTTCAACGGTATCGGAGCCT-------------------
#=GS KwoHev/30-128 DE ASQC01000174.1:20492-20979 Kwoniella heveanensis CBS 569 cont2.174, whole genome shotgun sequence
KwoHev/30-128               GAGCGACGATGAAACAAAAAAC---------------ACCTAATCG--TATTCACACTGTGCGACTCTTTCGAGAGGATGCGCGTAAAAATTTTT-CTTACAACGGTATCTGAGCTC-------------------
#=GS TreMes/6-93 DE SDIL01000010.1:293470-293624 Tremella mesenterica strain ATCC 28783 supercont1.10, whole genome shotgun sequence
TreMes/6-93                 TCGCCATGAAGAAGACAAATT----------------TTCTAATCAA-TATTCACACTGTGCTAC--CTTCGG--GAATGCGCTTACAAC--------TTCAACGGTATCGGAGCGA-------------------
#=GS BulAlb/16-106 DE BCIX01000001.1:c6953141-6952988 Bulleromyces albus DNA, scaffold: scaffold_0, strain: JCM 2954, whole genome shotgun sequence
BulAlb/16-106               TGGCTATGATGACAAAACAG-----------------TCCTAATCG--TATTCACACTATGCTACTCTTTCGGGAGAATGCGCGTACCAA-------CTTCAACGGTATCCGAGCCA-------------------
#=GS CryGC4/36-124 DE JALPCA010000812.1:c1730-1555 Cryptococcus sp. GC_Crypt_4 iso00_46_846, whole genome shotgun sequence
CryGC4/36-124               TGGCTATGAAGAAAAACACT-----------------TCCTAATCG--TATTCACACTGTGCTAC--TCCAAGGAGAATGCGCGCAAACA-------CTTCAACGGTATCGGAGCCT-------------------
#=GS SNORD41/2-70 DE 28S:U4276 Homo_sapiens SNORD41 http://snoopy.med.miyazaki-u.ac.jp/snorna_db.cgi?mode=sno_info&id=Homo_sapiens300559
SNORD41/2-70                GGGAAGTGATGACACCTGTGACTGTTGATGTGGAACTGATTTATCGCGTATTCGTACTGGCTGATCCTG-------------------------------------------------------------------
#=GS SacCer-snR51/1-107 DE 18S:A100,25S:U2729  Saccharomyces_cerevisiae snR51 http://snoopy.med.miyazaki-u.ac.jp/snorna_db.cgi?mode=sno_info&id=Saccharomyces_cerevisiae300057
SacCer-snR51/1-107          -TATTATGATGATTTTTTTA----------------------------TATTCACACTGTACTAGATTGGTCTCTTTAACGAAGGGGCTAATTGATGACTACAAAATAAAAAATAACTGATTTAATGACTCTGAAA
Annot-SacCer51/1-45         -----RTGATGA------------------------------------AUAAGUGUGAC-CTGA---------------------------RTGATGA------------------GACUAAAUUACU--CTGA--
#=GS SacCer-snR79/1-85 DE 18S:C1007 Saccharomyces_cerevisiae snR79 http://snoopy.med.miyazaki-u.ac.jp/snorna_db.cgi?mode=sno_info&id=Saccharomyces_cerevisiae300003
SacCer-snR79/1-85           -TTTAATGATGATAGCATGATTTATGTTGCTCGAAGTTAATCG----------------------------ATGTGAGCACAATGATTTCTCAA-GACTACAACGGTATCTGAAT---------------------
Annot-SacCer79/1-47         -----RTGATGA-------------------CTGA------------------------------------RTGATGA-----GCUAGGGGAUU-CUGAUGCUGCCAUACTGA-----------------------
//

  • Source transcript context snR51-snR79:

# STOCKHOLM 1.0
#=GF RW van Nues, July 2023
#=GF https://coalispr.codeberg.page/paper
#=GS transcript-with-ncRNAs-as-CNAG_05651/1-967 DE 14: [881,099 - 882,066] (+967)
transcript-with-ncRNAs-as-CNAG_05651/1-967         ATCTATTTCCATCATCCAGCTCCTTCGGCATGCAGCCACTATCATAGAAACTTTTTT------------CATTCCCATTGTCGCTACCTACACACCACATTCCATTCAACCCGCGGTTCTTAGATCCACGACTAGGAG-GATTATCTTCCTTCCCTCCGTTCCTCCTTCT----------------------------------------------CCAGATAGGTTGAGCGGAGCAT-AAGGTTAATGGGTCCTCCGCCAGCCCTGCCAGGCTGTGCGATTGGTCGCTGTATGAGTCAACCCGTGGAAGAGC-ATTGCCCATGTTAACTGTGTCTCGTCATGTTCTGCTCGTTTTGAGTGGGATTGGTGCGGTCGGTTTACTTATTTGCCATGCCGTTTTGGCTAGGTGAATGGGCTGCTGGTAGGTGGTGCCAGGTCTGACTATCTCATGTT------------------GGTCTGGATTA-CCTTTGTAGCAAAAATCT---TTTGACATTTCATATATTCTAGT---------------------------TTTGTGAGTATCCTTTCCTCTTTT-----------------------TTTTTTCATTGCCTTCCCATCTATCACATCGTATGATGATA--CAACCTC-CTAATCG-TATTCACACTGTGCGACT-CTTCGG-AGCATGCGCGTAACCTT---CCTTACAACGGTATCTGATACTCTA-CTTCT-CTTTCTTTATGTTCTCAACTGGT-----------------TGAAACGTTCTGTTGCTGACAATTGAAAAGGTTT-------TCTAGGTTGAATT----GTGTTACCATCAGATATCACTGTCTCGCAGCTATATGCATGACCTATTGTATTGCTATTTCTTC--------------------------------------CCTGCCATCTGCTTTACTCTTGGCAGCTTACATCGACTGTTATTCACTCCGCTATTCACTCCCCCTCTGAAGAGTTCTCGTCTGCTTTTAGCACTTTGATGGCGAGCACTTTCATAAGGCTG-GGAAAGA--GCAAACT----CGCCCTATGGATTTCGGCTTTGTCCTTGCA-------------TCAGCGGTGGACTGGGTCGATTGAAAGGGCGTGTACATAATTCTATAATTTCGTCATTATGCATTTATCGTT
#=GS AE017348.1:c304553-303587/1-967 DE Cryptococcus neoformans var. neoformans JEC21 chromosome 8 sequence
AE017348.1:c304553-303587/1-967                    ATCTCTTTGCATCACCCAGCTCTTTCGGCATGCAGCCACTATTATAGAAACTCTTTTT-----------CGTTCCTGATGTCGTTATCTACACACCACATTCCATCCAACCCGCGGTTCTTAGATCCACGACTAGGAG-GATCATCGCCCTTTCCTCCGTTCCTCCT-------------------------------------------------CCAAGTAGGTTGAGCGGAGCAT-GAGGTTAGTGGGTCCTCCGCCAGCCCTGCCAGGCTGTGCGATTGGTCGCTGTATGAGTCAACCCGTGGAAGAGC-ATTGCCCGTGGTAACTGTGCCCCATCACGTTCTGCTCGTTTTGAGCGGGATTGTTGCGGTCGGTCTACTGATCTGCCATGCCGTTTTGGCTAGGTGGATGGGCTGCTGGTAGGTGGTGCCAGGTCTGACTGTCTCATGTC------------------GGTCTGGATAA-CCTTTGTAGCAGAAATCT---TTTGACTCTTCGTATATTCTAGCT---------------------------TTGTGAGTATCCTTTCCTT--TTAC---------------------TTTTTTCATCGCCTTCCTATCCATCACATCGTATGATGATA--CAACCTC-CTAATCG-TATTCACACTGTGCGACT-CTTCGG-AGCATGCGCGTAACCTT---CCTTACAACGGTATCTGATACTAT--CTTATTTTTCTCTTATGTTCTCAACTGGT-----------------CGAAACGTTCTGTTGCTGACAATTGAAAAGATTC-------TCTAGGTCGAATTACTTGTGTAAACATCAGATATCACTGTCTCGCAGCTATATGCATGACCCTTTGTATTGCTATTTCTTC--------------------------------------TCTGCCATTTGCTTGACTCTTGGCAGCCTATCTCGACTGTCATTACCCC--CTATTCACTCCCCCTCTGAAGAGTTCTCGTCTGCTTTTAGCACTTTGATGGCGAGCACTTTCATAAGGCTG-GGAAAGA--GCAAACT----CGCCCTATGGATTTCGGCTTTGTCCTTGCA-------------TCAGCGGTGGACTGGGTCGATTGAAAGGGCGCGTACATTATTCTATAATCTCATGAGTATGCATTTATTGTT
#=GS WM276/1-964 DE CP000297.1:774992-775955 Cryptococcus gattii WM276 chromosome L, complete sequence
WM276/1-964                                        ATCTATTTCCATCATCCAGCTCCTTCGACATGCAGCCGCTTTTTTAGAAACTTTT--------------CGTTCCCGTTGCCTCTACCCATACACCACATTCCATCCAATCCGCGGTTCTTAGATCCACGACTAGGAG-GATCATCGTCCTTTCCTTCGTTCCTCCT-------------------------------------------------CCCAGTAGGTTGGGCGGAGTAT-GAGGTTAATGGGTCCTCCGCCAGCCCTGCCAGGCTGTGCGATTGGTCGCTGTATGAGTCAACCCGTGGAAGAGC-ATTGCCCATGGTAACTGTGCCC-ATCATGTTCTGCTCGTTTTGAGCGGGATTGTG-TGGTCAGTATACCGATTTGCCATGCCGTTTTGGCTAGGTGAATGGGCTGCTGGTAGGTGGTGCCAGATCTGACTATCTCGTGTC------------------GGTCTGGATAA-CCTTCGTAGCAAAAATCT---TTCGACA-TTCATATTTACTAGT---------------------------TATGTGAGTACTCTTTCCTTCTTTAC--------------------TTTTTTTCATCGTCTTCCCATCTATCACATCGTATGATGATA--CAACCTC-CTAATCG-TATTCACACTGTGCGACT-CTTCGG-AGCATGCGCGTAACCCT---TCTTACAACGGTATCTGATACTATACCTCTTTTTCTTCCTACGTTCTCA-ACGGTT----------------TGAAAT-TCCTGTTGCTGACAATTAGAAAAGGTT-------CTCAGGTTGAATTACTCGTGTTCACATCAGATAATTCTGCCTCGCAGCTATATGCATGACCTATGTATCACAATTTTCT----------------------------------------CCTGCCATCTGCTTGACTCTTGGTAGCCTACCTCGATTGTCATCCACTCCCCTATTCAATCCCCCTCTGAAGAGTTCTCGTCCGCTTTTAGCA-TTTGATGGCGAGCACTTTCATAAGGCTG-GGAAAGA--ACAAACT----CGCCCTATGGATTTCGGCTTTGTCCTTGCA-------------TCAGCGGTGGACTGGGCCGATTGAAAGGACGTGTACATTATTTTATAATTTCATCCGTATGCATTTATCGTT
#=GS R265/1-967 DE CP025768.1:770439-771405 Cryptococcus gattii VGII R265 chromosome 10, complete sequence
R265/1-967                                         ATCTGTTTCTATCATCCAACTCCTTCGACATGCAGTCACTGTTTTAGAAACTTTT--------------CGTTCCCGCTCCCTCTATCCATACACCACATTCCATCCAATCCGCGGTTCTTAGATCCACGACTAGGAG-GATCATCGCCCTTTCCTTCGTTCCTCCTTCT----------------------------------------------CCCAGTAGGTTGGGCGGAGTAT-GAGGTTAATGGGTCCTCCGCCAGCCCTGCCAGGCTGTGCGATTGGTCGCTGTATGAGTCAACCCGTGGAAGAGC-ATTGCCCATGGTAACTGTGCCCCATCATGTTCTGCTCGTTTTGAGCGGGATTGGTGCGGTCAGTATACTGATTTGCCATGTCGTTTTGGCTAGGTGAATGGGCTGCTGGTAGGTGGTGCCAGATCTGACTATCTCATGTC------------------GGTCTGGATAA-CCTTTGTAGCAAAAATCT---TTCGACAT-TCATATTCACTAG---------------------------TTCTGTGAGTACTCTTTCCTTCTTTAC---------------------TTTTTTCATCATCTTCCCATCTATCACATCGTATGATGATA--CAACCTC-CTAATCG-TATTCACACTGTGCGACT-CTTCGG-AGCATGCGCGTAACCCT---TCTTACAACGGTATCTGATACTATACCTCTTTTTCTTCATATGTTCTCA-ACGGT-----------------TTGAACGTTCTGTTGCTGACA-TTGAAAAAGGTC-------TTTAGGTTGAATTACTCGTGTTACCATCAGATAATTCTGTCTCCCAGCTATATGCATGACCTGTGTATCACTATTTCTCT---------------------------------------CCTGCCATCTCTTTGACTCTTGGTAGCCTACCTTGATTGTCATTCACTCCCCTATTCACTCCCCCTCTGAAGAGTTCTCGTCCGCTTTTAGCA-TTTGATGGCGAGCACTTTCATAAGGCTG-GGAAAGA--ACAAACT----CGCCCTATGGATTTCGGCTTTGTCCTTGCA-------------TCAGCGGTGGACTGGGCCGATTGAAAGGACGTGTACATTATTCTATAATCTCATTAG-ATGTATTTATCGTT
#=GS CryWin/1-915 DE CP034264.1:951319-952310 Cryptococcus wingfieldii strain CBS7118 chromosome 4, complete sequence
CryWin/1-915                                       ----TCTCATCTTTCTCTCACTTTACGCCATGCAGGCTTTTATCCTACCACCCTTCTATCCATCT----TGACTTTTACCACACCTCCCCTCCCTCTCCCACTCTCCCACCCGCGGTTCTTAGATCCATTACCAGGA-TGACTATCCCCCTTCCCTCTCTTCACCCCGCACCTC-----------------------TTTCTCCTCGGAGACTGGAACATGGGCTGTGAAGTGAGCATAAGGGTTAACGGGTCTTCCGCCAGCTCTGCAAGGCTGTGCGATTGGTTTTTGTTTGAGTCAACCCGTGGAATAGTGATTGCCCCT---------TTTTCG----GTCCTCGACTTTTTG-------TTGGGTTGACTGGATTCTTTTCCTTTTT-GCCGTTTTGGCGAGCTGG--ATGGGGTTGCTGGGAGGTGTGGCCTGAGCTAATCTCATAGT------------------GGCTTGGATCAGTCCTCTCTGCAGACATTTA---TCAACATCGCCTTT--CATAGGTATTCCCAA-------------------TGGTGAGTCTTTCTCCATCCTCC--------------------------TTCTCATTCTCTCCCATT--TCACA----ATGATGAAA-CAAAAATT-TTAATCG-TATTCACACTGTATAAC--CTTCGG--GAATGCACGCAACCTATTTTTCTACAACGGTATCTGATACC----TTCTTTACCCCATCTTGTTTTAATACGAAA----------------AAATGAGAATCACGGCTGACAATCACAA-AGCTT-------GATAGGTCTTTATTTA-GTG--GCCCAATGCATAT--CATC-----ACTATA--------------------------------------------------------------------------------------------TTCGTTCTGTCCAGTCATATTTTACATACCATATCCCCCCGCGAAAGGGTTCTCGTCTGCTACAAGCACACCCATGACGAGCACTTCTATA----TGGGGAGGATAGACAGACTGATTCGTCCTATGGATTTAGGCATCATTCTAGCAA------------TTTGCGGTGGATGGGGTCAATTGAAAGGACGTGCACATACTTGTCTGCATGTATACATCATATTTATCTGCC
#=GS CryFlo/1-589 DE RRZH01000006.1:937000-937588 Cryptococcus floricola strain DSM 27421 chromosome 6, whole genome shotgun sequence
CryFlo/1-589                                       --------------------------------------------------------------------------------------------------CCACACTCCCACCCGCGGTTCTTAGATCCATTACCAGGA-TGACTATCCCCCTTCCCTCTCTTCACCCCGCACCTC-----------------------TTTCTCCTCGGAGACTGGAACATGGGCTGTGAAGTGAGCATAAGGGTTAACGGGTCTTCCGCCAGCTCTGCAAGGCTGTGCGATTGGTTTTTGTTTGAGTCAACCCGTGGAATAGTGATTGCCCCT---------TTTTCG----GTCCTCGACTTTTAG-------TTGGGTTGACTGGATTCCTTTCCTTTTT-GCCGTTTTGGCGAGCTGG--ATGGGGTTGCTGGGAGGTGTGGCCTGAGCTAATCTTACAGT------------------GGCTTGGATCAGTCCTCTCTGCAGACATTCA---TCAACATCGCCTT---CATAGGTATTCCCAA-------------------TGGTGAGTCTTTTTCCATTCTCC--------------------------TTTTCATTCTCTCCCACT--TCACA----ATGATGAAA-CAAAAATT-TTAATCG-TATTCACACTGTATAAC--CTTCGG--GAATGCACGCAACCTATTTTTCTACAACGGTATCTGATACC----TTCTTTACCCCATCTTGATTTGATACGAAA----------------AAATGAGAATCACGGCTGACAATCACAA-AGCTT-------GATAGGTCTTTATTTA-GTG--GCCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
#=GS CryAmy/1-589 DE MEKH01000004.1:c639260-638672 Cryptococcus amylolentus CBS 6273 supercont2.4, whole genome shotgun sequence
CryAmy/1-589                                       --------------------------------------------------------------------------------------------------CCACACTCCCACCCGCGGTTCTTAGATCCATTACCAGGA-TGACTATCCCCCTTCCCTCTCTTCACCCCGCACCTC-----------------------TTTCTCCTCGGAGACTGGAACTTGGGCTGTGAAGTGAGCATAAGGGTCAACGGGTCTTCCGCCAGCTCTGCAAGGCTGTGCGATTGGTTTTTGTTTGAGTCAACCCGTGGAATAGTGATTGCCCCT---------TTTCCG----GTCCTCGACGTTTTG-------TTGGGTTGACTGGATTCTTTTCCTTCTT-GCCGTTTTGGCGAGCTGG--ACGGGGCTGCTGGGAGGTGTGGCCTGAGCTAATCTTATAGT------------------GGCTTGGATCAATCCTCTCCGCAGACATTCA---TCGACATCGCCTT---CATAGGTATTCCCAT--------------------GGTGCGTCTTTTTCCATCCTCC--------------------------TTCTCATTCTCTCCCATT--TTACA----ATGATGAAA-CAAAAATT-TTAATCG-TATTCACACTGTATAAC--CTTCGG--GAATGCACGCAACCTATTTTTCTACAACGGTATCTGATACC----TTCTTTATCCCATCTTGTTTTGATACGAAA----------------AAATGAGAATTACGGCTGACAATCACAA-AGCTT-------CATAGGTCTTTATCTA-GTG--GCCCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
#=GS KwoShan/22-989 DE NQVO01000005.1:266109-267155 Kwoniella shandongensis strain CBS 12478 scaffold00005, whole genome shotgun sequence
KwoShan/22-989                                     TGCCTCTTACTACTTTACTTTCATTCGACATGCAACTCGTTACTCTTTACCTTCCCAACCCTGTTCATCACCTCCCTCCGTCCTCCTCACTCTACATCCCCATCT-CAACCCGCGGTTCTTAGATCCACTACCAGGAGTGACTATCCCCTCTCCCTCTTCTTCC-----------------------------------AGTCGCAAAATTAAAAACTTTCGATTGGAAGAGGAACATGGAGGTTAATGGGTCCTCCGCCAGCTCTGCAAGGCTGTGCGATTGGTCGTCGTATGAGTCAACCCGTGGAATAATGCTTGCC------------TAAATA--------CCGCTTTATCGTCAGATAATGTGGTGTTTCTCGAAAA----------GCCGTCTTGGCGATTCGAA--AAGGTTGCAAATGGGGTGTAAAGAATCT---TCTCATAAGC----CGAGCTCTCCAAGAGCTTGGAGTTACATCTCAAGCAGACATATCTTTATCACACTTCGACAACGATTTTCTTTCTTT--------------GTGACTAGGTGAGTTACAGTCTCCTTCCAC--------------------TCCCTTCCCCATCCACTCCCAA--TCCCTGAGCAATGACGAAAATCATTTTC-CTAATCG-TATTCACACTGTGCGACT-CTTCGG-AGAATGCGTATAACCA----TCTTACAACGGTATCGGAGCTCTCACCATTCACTCGTCTTTTTCTCTACATTTTCAA------------TTTAAATGAGAATGAGCGCTGACGGACGAAATAGCCTATTGTAATTTAGGTTCAATTATAGATTGTACCATCTATGTAT-CTGATGTCTTGCTATAACGCATTCCCACTCTCC-----------------------------------------------------------------------------ATTTCAGGATTTTCACTTACTCCGACTGCCTCCCCTATGCTGAAGTGTTCTCGTC-------GCAAATACCTCACGACGAGTACTTCTCAGCAGAGGGAGAGAATGTACACCACTACGCTCTATGGATTTAGGCACTGTTCTTGCT-------------AAAGCCGTGGACAAGGTCAATTGAAAGAGCACGGACATCGAATCATCATTTTCGTTCATATACATTATAATC
Annot/1-13                                         ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGrGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGA------------------------YAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
#=GS HACAcnag05651-2/1-150 DE HACAsnoRNA-151nt ncrna 8:303617:303767:-1 AE017348.1:c303767-303618 Cryptococcus neoformans var. neoformans JEC21 chromosome 8 sequence
HACAcnag05651-2/1-150                              ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCCCCTCTGAAGAGTTCTCGTCTGCTTTTAGCACTTTGATGGCGAGCACTTTCATAAGGCTG-GGAAAGA--GCAAACT----CGCCCTATGGATTTCGGCTTTGTCCTTGCA-------------TCAGCGGTGGACTGGGTCGATTGAAAGGGCGCGTACATTAT-------------------------------
#=GS HACAsnoRNA-in-exon2-CNAG_05651/1-150 DE CP003833.2:881886-882035 Cryptococcus neoformans var. grubii H99 chromosome 14, complete sequence
HACAsnoRNA-in-exon2-CNAG_05651/1-150               ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCCCCTCTGAAGAGTTCTCGTCTGCTTTTAGCACTTTGATGGCGAGCACTTTCATAAGGCTG-GGAAAGA--GCAAACT----CGCCCTATGGATTTCGGCTTTGTCCTTGCA-------------TCAGCGGTGGACTGGGTCGATTGAAAGGGCGTGTACATAAT-------------------------------
#=GS R265/1-149 DE CP025768.1:771227-771375 Cryptococcus gattii VGII R265 chromosome 10, complete sequence
R265/1-149                                         ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCCCCTCTGAAGAGTTCTCGTCCGCTTTTAGCA-TTTGATGGCGAGCACTTTCATAAGGCTG-GGAAAGA--ACAAACT----CGCCCTATGGATTTCGGCTTTGTCCTTGCA-------------TCAGCGGTGGACTGGGCCGATTGAAAGGACGTGTACATTAT-------------------------------
#=GS WM276/1-147 DE CP000297.1:775778-775924 Cryptococcus gattii WM276 chromosome L, complete sequence
WM276/1-147                                        --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCCCTCTGAAGAGTTCTCGTCCGCTTTTAGCA-TTTGATGGCGAGCACTTTCATAAGGCTG-GGAAAGA--ACAAACT----CGCCCTATGGATTTCGGCTTTGTCCTTGCA-------------TCAGCGGTGGACTGGGCCGATTGAAAGGACGTGTACATTAT-------------------------------
#=GS CryFlo/1-155 DE RRZH01000006.1:937638-937792 Cryptococcus floricola strain DSM 27421 chromosome 6, whole genome shotgun sequence
CryFlo/1-155                                       -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCCCCCCGCGAAAGGGTTCTCGTCTGCTACAAGCACACCCATGACGAGCACTTCTATA----TGGGGAGGATAGACAGACTGATTCGTCCTATGGATTTAGGCATCATTCTAGCAA------------TTTGCGGTGGATGGGGTCAATTGAAAGGACGTGCACATACT-------------------------------
#=GS CryWin/1-155 DE AWGH01000003.1:858038-858192 Cryptococcus wingfieldii CBS 7118 supercont1.3, whole genome shotgun sequence
CryWin/1-155                                       -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCCCCCCGCGAAAGGGTTCTCGTCTGCTACAAGCACACCCATGACGAGCACTTCTATA----TGGGGAGGATAGACAGACTGATTCGTCCTATGGATTTAGGCATCATTCTAGCAA------------TTTGCGGTGGATGGGGTCAATTGAAAGGACGTGCACATACT-------------------------------
#=GS CryAmy/1-154 DE MEKH01000004.1:c638623-638470 Cryptococcus amylolentus CBS 6273 supercont2.4, whole genome shotgun sequence
CryAmy/1-154                                       -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCCCCCCGCGAAAGGGTTCTCGTCTGCTACAAGCACACCCATGACGAGCACTTCTATA----TGGGGAGGATAGACAGACTGATTCGTCCTATGGATTTAGGCATCATTCTAGCAAA------------TTGCGGTGGATGGGGTCAATTGAAAGGACGTGCACATAC--------------------------------
#=GS KwoMan/1-161 DE ASQF01000019.1:c166475-166301 Kwoniella mangroviensis CBS 8886 cont1.19, whole genome shotgun sequence
KwoMan/1-161                                       --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCATACAATCCCCATCACTGAAAGGTTCTCGTTTTCTTTGTATCCACA----ACGAGCGCTCTCAAATA--TGGGGAAAGATCAAACCCCACTTCGTCTCATGGATTTCGGCTTTATTCTTGC-------------TTTTGCTGTGGATCAGGTCGATTGAAGAGGCAAAGACAGATA-------------------------------
#=GS KwoBes/1-158 DE ASCK01000002.1:c1081492-1081301 Kwoniella bestiolae CBS 10118 cont1.2, whole genome shotgun sequence
KwoBes/1-158                                       ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACCCCATCACTGAAAGGTTCTCGTTCTT-ATACAATCACA----ACGAGCGCTCTCAAATA--TGGGGAAAGATTAAACCCCACTTCGTCTCATGGATTTCGACTTTATTCTTTGGC-------TTTTTCAAGCCGTGGATCGGGTCGATTGAAGAGGCAAGGATATATC-------------------------------
#=GS KwoDej/1-165 DE ASCJ01000022.1:c145407-145229 Kwoniella dejecticola CBS 10117 cont1.22, whole genome shotgun sequence
KwoDej/1-165                                       ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCCCCATCACTGAAAGGTTCTCGTATG-----TACACACCCACGACGAGCGCTCTCAAATA--TGGGGAAAGAATAAACCCCACTTCGACTCATGGATTTCGGCTTTGTTCTTTGCCTTGAATAATATTTTCGGTGTGGATAACGTCGATTGACGAGTCAAGGATATCTC-------------------------------
#=GS TreFuc/1-569 DE BRDD01000107.1:217708-217976 Tremella fuciformis NBRC 9317 DNA, KCNB80TF.107, whole genome shotgun sequence
TreFuc/1-569                                       ---------------------------------------------------------------------ACTATTGACCCCTCGATCCACCTCTCCCCCCCACCT-CGACCCGCGGTTCTTAGATCCGCTACCAGGAG-GATCCCTCCCCT--CTTCCCCTCCACCCGACTACCC---------------------TTGACCGGGGAAACGGTGGAATGGTTT------GCGAAGAGGACA------GAGGCCCTCCGCCAGC-CTGCC-GGCTG-GCGATTGGTCAGCGCATGAGTCAGCCCGTGGAAGAGT-AT-CTCCCA-------GCCCTCTCCGAGG------TTGTTTTGATCGACGAGAGGGCG-------CTTTGCTGCG-GAT-CAA---TGA--GAAT--ATCGCGGGCTGT---------CCAATGATGGATTGACC------------------------GTTTACACCC--------AGCGCAAATTCCTTGTATACATTGCAC-------------------------------------TTGGTGAGTCTCACCCTCCATCC---------------------------TCTTTGCTTTCCCCTTCTACCCACTCGCGATGAAGAAG-CAAAACTT-CTAATCGATATTCACACTGTGCGACT-CTTCGG-AGGATGCGCGT-ACAA----CTT--CAACGGTATCGGAGCG-AACCCCTCTTCTATCTGTCT-CAAC------------TGGCTACGTTTCGCGTCCTGTCCAGTAGCTGAC--TCGA-----------------CAGTACCATGTATCCCTTGTAATCCCATGCATTCGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
#=GS TreTag/92-737 DE CAJHEQ010000099.1:c4138-3402 MAG: Tremellales sp. Tagirdzhanova-0007 genome assembly, contig: TREM_99, whole genome shotgun sequence
TreTag/92-737                                      ACAACATTCTTGTTCATAAAAAGCTGAATGATCACTCCATCTCTCTCTCCACAAGTTTATATAGCTCTAGCATGCACGCGTTCGACAACACCTCTTCCCTCCCGTATATCCCGCGGTTCTTAGATCCACGACTAGGAG-GACACCATCCTCGCTTTCCCCCTAGATCCCTT----------------TGTCCTTGTATAGAGGGGGTTTTGGTGGGGTTCGCG------------------------AGCGTCCTCCGCCAGC-CT-CCAGGCTGCGCGATTGGTCGTCGCATGAGTCAACCCGCGGAACATCGATAGCTCCT---------GCTTTTTCCGTATATGGTCTGCGGAAAGGCTTACTCGCTGATCGTCTTGGTCGAAGAGTGGGCTTGCTGGGACGCTTACGTGGGCTACGACGT-GTGGT-------CTGCTTA------------------------------GCG--------TTT--GGCAGAAATTCCTGATTCCCATTGGATCACTCTCGTCTTTTTCCGCTCTTGGTTGACGTAT---CATGTGAGTGTTATTTCTCTTG---------------------------------TCGTTCTACCCCTCTACGCGAGCTATGAAGAAGAACATTTAT-CTAATC--TATTCACACTGTGCGAATCCCTCGGGAGAATGGGCTTAACAA----CTT--CAACGGTATCGGAGCTCTATGACTTAACCTTCTTTCTTCAAC---------------CTGTATTCCAAAGATAGCACGAGTGCTGACACTTGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
#=GS HACAcnag05651-1/1-327 DE 327nt-ncRNA ncrna 8:304130:304457:-1
HACAcnag05651-1/1-327                              -----------------------------------------------------------------------------------------------------------AACCCGCGGTTCTTAGATCCACGACTAGGAG-GATCATCGCCCTTTCCTCCGTTCCTCCT----------------------------CCAAGTAGGTTGAGCGGAGCATGAGGTTAG----------------------TGGGTCCTCCGCCAGCCCTGCCAGGCTGTGCGATTGGTCGCTGTATGAGTCAACCCGTGGAAGAGC-ATTGCCCGTGGTAACTGTGCCCCATCACGTTCTGCTCGTTTTGAGCGGGATTGTTGCGGTCGGTCTACTGATCTGCCATGCCGTTTTGGCTAGGTGGATGGGCTGCTGGTAGGTGGTGCCAGGTCTGACTGTCTCATGTC------------------GGTCTGGATAA-CCTTTGTAGCAGAAATCTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
#=GS HACAsnoRNA-in-exon1-CNAG_05651/1-326 DE 14: [881,195 - 881,521] (+326)
HACAsnoRNA-in-exon1-CNAG_05651/1-326               ------------------------------------------------------------------------------------------------------------ACCCGCGGTTCTTAGATCCACGACTAGGAG-GATTATCTTCCTTCCCTCCGTTCCTCCTTCT-------------------------CCAGATAGGTTGAGCGGAGCATAAGGTTAA----------------------TGGGTCCTCCGCCAGCCCTGCCAGGCTGTGCGATTGGTCGCTGTATGAGTCAACCCGTGGAAGAGC-ATTGCCCATGTTAACTGTGTCTCGTCATGTTCTGCTCGTTTTGAGTGGGATTGGTGCGGTCGGTTTACTTATTTGCCATGCCGTTTTGGCTAGGTGAATGGGCTGCTGGTAGGTGGTGCCAGGTCTGACTATCTCATGTT------------------GGTCTGGATTA-CCTTTGTAGCAAAAATCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
#=GS CrySki/1-993 DE BCHT01000004.1:c997544-996802 Cryptococcus skinneri DNA, scaffold: scaffold_3, strain: JCM 9039, whole genome shotgun sequence
CrySki/1-993                                       ------------------------------------------------------------------------------------------------CGTTCACCTTCGATCCTCGGTTCTTAGATCCGCGACTAGGAG-GACGCAATCTCTACCCTTTTCCCCTCGAGGTCCCCTCCCATCCTTCACCTCTGTCATGGAGACTGAAGGACGGTGACGATCTAGAGTT--GAGGATTAGGCTGTA-CGAGAGTTCTCCGCCAGCTCTACCAGGCTGAGCGATTGGTCGTCGTATGAGTCAACCCGTGGAAGAGC----------------TTCTTGTCCAAATCCCTTCTTGGTGTTTTGGTCTTACCGGGAGGGAGAGTTGACCTGTCGTCTTGACGGGTCTGCATGGACGGC--TTTGGTAGTCTTTGATACCATGGTGAATCGTCTCTCGATTCATCA-----------GACATCG-------------AGCCGAAATTTCTTCGCCGCTTTCACGATATTTTCTTGTATCAGACAGGGTTGGAAATCGATTAAACGTGAGTGTTGTTCGTTACTC-TCTTGTTTTGAC---------ACCTTTATCCCACCTCCCCTTCCCAATCCGAGCTGTGATGACAAAAAACTTT-CTAATC--TATTCACACTGTGCTACTCCTTCGGGGGGATGCGTAT-ACA----------CAACGGTAACTGAGCTCTCAACCCTATTTATCTGCTT-----------GTTTCTTTTGGTCGAGACTGGGTTTGATGGGATGCTGACGATTCTTTGTCTCGTCACT----TAGGCCATTCTCTACTGATTTCCTCTATGCATGTTACATTCCTTTCATGGTCTGCGTCCTCATCGAACCCTGTCTTGAGCAGGCTATAGATTCTCAGCTTGTCATTAACACGGTTAGCCGTTGTCCACAGACCCGGTTCCCTTCAATCTGCAAACAGACCACAGAACACTTCACTCCCCATCACTAAAGAGCCCTCATCCGCTCCTCTACGGCGAGGAGC-------TCTCCAAA-TTGGAGGAAAGATGAATCATGTC-CGACTCATGGATTTCGACCAGGCTCTCCGCTT-------CGGCG-GCCGTGGGCTTAGGCCGATTGAAGAGACGGGGACAAGTTTGAGGTTTGCGTTGCAAAGTAGCCT------
#=GS NaeEnc/1-897 DE MCFC01000068.1:78283-79199 Naematelia encephala strain 68-887.2 BCR39scaffold_68, whole genome shotgun sequence
NaeEnc/1-897                                       --------------------------------------------------------------------------------------TCTTACCACTCCCCCAACT-ATTCCCGCGGTTCTTAGATCCGCGACCAGGAG--ATCAGCTCCTCTCCCCTCCCAACCTCTCTTTC-GTACTC-------------GGTATGATCCAAGAGTCAGGTTTGGTGATTTCAA---GCGGGAGAAGCA------GGAGCCCTCCGCCACCTCTGCAAGGGTGTGCGATTGGTCGTCGCATGAGTCAACCCGCGGAACATCTACCAGGCC--TTTGTGATTCCCTTTATAAAA---CCTCGCTCGCGGGGTTAAGGGTGAATTTCTGCTAGAAGAT-------CGTTTTGGT-CGTCGAGCGGGCTTGCTACGGTCATAAGTGTCTTGTCGTTCTGACTAT----------------GATGCTTTGATCAAC-------AGCAGAGATCTTCTTACCTTTTTGCTCTATTTTCTTTCTTTCTGTCCCCCCTTAAAACAA-----TAGTGAGTGTCTGTCTA-------CCTCTTCCCCA---------TAACCCTTCCCCTTCGAGATGACGGGAGAGAGCCATGAAGAAAGAAAAGAGT-CTAATCG-TATTCACACTGTGTTACT-CTTCGG-AGGATGCGCTTACCAA----CTT--CAACGGTATCGGAGCTCTCACCCGTCTTCTCGATGTTTTTCTTTTTCTTTTTCGAAATCGTCTACCTATGTGTAATGTTTTGCTGACAGCTGT-----------------CAGGTT--TCTCTCATATTATGCTGAATGCAACCCCATGTCCTCATGAAAATGACATGTAGTTCTCTCACTGACC---------------------------------------------------------------------------------GATTCTTACACAC--CCATCCCTATCACAAAAAAGCTCTCGTCTCAACTTC-GTGGCA-AGAGC-------TTTCCAA-TCT--AGGGATAGAT-CAACTCC---ATCCCATGGATTTCGTCTAGGTTCTGAGC-GTTCAAAAAGG--ACGCGGTGGATTCGGTCGATTGTAGGGGCGGATACACCACTAACCCACTCAATGCCTTTCGAGACTACTAG
#=GS NaeAur/1-982 DE JAKFAO010000004.1:751858-752914 Naematelia aurantialba strain NX-20 Contig4, whole genome shotgun sequence
NaeAur/1-982                                       --------------------------GTCATGCATCGTATCTCTTCCACTCTTCTTGTCGGCGGTTTCTAAATAATTTTGTCTCTTCCTGGCGACTCCCCACGCT---CCCCGCGGTTCTTAGATCCACGACCAGGAG-GACCAGCTCCTCTCCCCTCCCAGCCTCTCCTTTCGTCCCC-------------------GGTACGAATCCCGGAGCCAGGTTGGCGATT-CAGGTGGGAGATGCAA--GGAGCCCTCCGCCACCCTTGCCAGGGTGCGCGATTGGTCGTCGCATGAGTCAACCCGCGGAAAATCTACCCGGCC-TTTATTGCCTTTACCTTAATCGCTTTTTAGCATGAGGGGTCTGGGGAATCTTGGCTCGAGGAC---------CGTCTTGGTTGTCGAGC-GGGCTTGCTACGATTCACAGTGTCTTGCTGTTCCAGAAGAT-----------------CACTGTGG-----ACCACT-AGCAGAGATGCTTTC-TTTCATCTTCCCTTCCTGTGCGGAGTCGTCTTGC-----------TATCATGTGAGTGATTTCTCTCACCTTCATCTCACC-------------------TGGATTCATTTCATGATGGCGAGAGCGATGAAGAAAAACAAGAGT-CTAATCG-TATTCACACTGTGCTACTCTACCCG-AGGATGCGCTTATCAA----CTT--CAACGGTATCGGAGCTCTCACCCCATATTCTGTTGTCCTTTCGA----------------AGAATGCTTATTGTGGTCTCTACTGACATGTCTGT---------------CAGGTT-CCCCTTCATATCGTGCAAGATGCATACAT-TGAGATTTTTCCGAAATGGGCGGAGTACGTTTGACCTC--------------GTTGCTTATCGAAAGTTACCGGTCGAGGC-----------------ATCAGGTATTTTACGCTACT-GATTTAGACATCCTTACATCCCTGTCACAAAAAAGCTCTCGCCCCCATTCTTGTGGCA-AGAGC-------TTTCCAA-TCT--GGGGACAGAT-CGACTCC---ATCCCATGGATTTCGTCGGGGTTCTGAGC-GCC--AACAGG---CGCGGTGGATTCAGTCCATTGAAGGGGCGGATATATATCATTAGA---TGTGGCGCAAATATCCTCTCAA
#=GS TriInk/95-975 DE JXYM01000003.1:c2483108-2482763 Trichosporon inkin strain JCM 9195 scaffold_0003, whole genome shotgun sequence
TriInk/95-975                                      CATTGACCGGGCTCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTCCTTCCTCACCATCGTTCCTGCCGTTCCCTCTCTACCCTTCTCTCCAACCCGCGGTTCTTAGATCCGCGACTAGGAG-GATCACGCCAATGGTCTCTGTCGAGCTTCGCGCTT-------------------------------------------------------GATACATCAGAC------AGCGCCCTCCGGGAGCCTT-TC--GCTCGCCGATTGGTCG-CGTATGAGTCAACCCGTGGAAGAGCGTTGCTGTC--GCCAAGCCTCTCGTTCTGAGTTGGCTCGGTGTTTTTCTGGATACTACTCCGTTTTGGAGCATCCGGCCGGCATGCTTGGATCCCGACCGCTGGCTGAGGGCAGCTCTGCCTGAGCGTTCTC-----TCCTTCAGACAGTGGTAG----GGTCCG-------------GGCGAACATCGCTCTGTACGTCAATTTTTTTTTCTTTGA-------------CCCTCTACACACTTTGTGAGT-ATTTCTTCCCTTCTGCTCGCACC-------------------------------CATCCCCACATTTTCATGATGATAAACACTCTT-CTAATCG-TATTCACACTGTGTTAC--CTTCGGGA--ATGCACGCAAAAG----CTTTACAACGGTATCTGATACCTCACCAC-TTCGCATTTTTCCTT----------------------------TGTCGAAACAAGCGCTGACAG---------------------TAGATC---ATCACAGAA---------TGTATCCCT---------------------------------------------------------TGTTTCAGTGGTCGCCGTCATCGAT-----------------GTCCGAGCCGATACTA-ACCAGTCACCTCCCC--AGAACTCCCGCACCTCTGAAGACCATCAGCCGGGCAACAACGGCA-------GTTGTGTTTCAAGCTGTGCGGGG---ACAACAGTTCC---ATCCTATGGATTTCGGCGCTTGTCGTGGGC--TTAA-------CGGCCGTGGCTGGTGCCGATTGTACGGTCGGGCACATTTCATTTGC-AGA--------ACGTCATAAACA-
#=GS TriAsa/15-892 DE JAMALY010000015.1:205888-206279 Trichosporon asahii strain Y3 ctg_15, whole genome shotgun sequence
TriAsa/15-892                                      CATTGACCGAGCTCCGTCTTCC---ACTGGTTTTCCCTTCCTCCATTTTCCCTCCCTTTTCCTCTCCTCTCCTCCGTTCCCCGCTCCTCTCCCTGCCTCTA--TCCCAACCCGCGGTTCTTAGATCCGCGACTAGGAG-GATCACGCCAATGGTCACTGCCGGGCT-CACGCTC-------------------------------------------------------GGCACATCAGAA------CGCGCCCTCCGGGAGCCTT-TC--GCTCGCCGATTGGTCG-CGTATGAGTCAACCCGTGGAAGAGCGTTGCTGTC--GCCAGGTCGCTCGTTCTGAGTCGGCCTGGTGTTTTTCTGGAAATCACCCCGTTTTGGGGCTTCCGGCCGGCATGCTTGGATCCCGACCGCTGGCTGAGGGCAGCTCCTCGCGAGCACTCCA-----TCCTTCAGGCGGTGGTAG----GGTCTG-------------AGCGAACATCGCTCTGTACCGATCGCATAATTTCTGCTAAAAA----------------------TTGTGAGTATCCTGCGCTTCGCACCCATCCCTCG------------------------------CACCTCGTCTTTTCATGATGACAAAAACTCTT-CTAATCG-TATTCACACTGTGTTAC--CTTCGGGA--ATGCACGCAAAAG----CTTTACAACGGTATCTGATACCTCCTCTA-CCCACACTTCTTTC---------------------------GCATTCGAAACAGGCGCTGACAGTAAAGACCTCA----------CAGATGA---ATACACTTGTTGT----TGTACACG-------------------------------------------------------------------ATCACCGGACATCGCGCACGTTTTACTGACCA-TGTACTAT--ACCTCGCCTCAACC-TTGCTTC----AACTCCCGTACCTCTGAAGACCACCAGCCGGGCCTCTACGGCA-------GTTGAGTTTCAAGCTGTACGGGG---ACAACAGTTCC---ATCCCATGGATTTCGGCGCTTGTCGTGGGC-TTTCA-------CAGCCGTGGCCTGTGTCGATTGAAGGGGCGGGTACATTTCCCCTCCATGAC--------------------
#=GS TriOvo/1-487 DE WEIQ01000002.1:390175-390661 Trichosporon ovoides strain 2NF903A scaffold2-size1541096, whole genome shotgun sequence
TriOvo/1-487                                       -----------------------------------------------------------------------------------------TCACCGACTCTA--CACCAACCCGCGGTTCTTAGATCCGCGACTAGGAG-GATCACGCCAATGGTCTCTGTCGAGCCTCGCGCTC-------------------------------------------------------GATACGCCAGAA------CGCGCCCTCCGGGAGCCTT-TC--GCTCGCCGATTGGTCG-CGTATGAGTCAACCCGTGGAAGAGCGTTGCTGTC--GCCAAGTCCCTCGTTTTGAGTGGATTCGGTGTTTT-CTGGAAATCACTCCGTTTTGGAGCTTCCGGTCGGCATGCTTGGATCCCAACCGCTGGCTGAGGGCAGCTCCTCGTCGAGCACTA-----TCCCTTCAGACAGTGGTAG----GGTCTG-------------AGCGAACATCGCTCTGTACTGAACCTCGATTTTTGGGGTTTTCTATAAA----------------TTGTGAGTATCAAATTTCTTCCTCGCCCCCATC------------------------------------CCTCCTTCCATGATGAGAACCACTCTT-CTAATCG-TATTCACACTGTGTTAC--CTTCGGGA--ATGCACGCAAAAG----CTTTACAACGGTATCTGATACCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
#=GS CryFla/15-933 DE CAUG01000665.1:c226167-225789 Cryptococcus flavescens NRRL Y-50378 WGS project CAUG00000000 data, contig NODE_2199_length_286162_cov_45_720577, whole genome shotgun sequence
CryFla/15-933                                      CACTCTCTCACCATCATACC---ATATATCCAGCTCATCTTTAGCATGCATCCAGTATATCTAGCCTCAGATCACCCTCTTCCCCTTCCCCCTCCCCTTCTCCGACCCTCCCGCGGTTCTTAGATCCACGACCAGGAGCGACATCCCC-TCGGACCCCTCTCGGCC---CGATA---------------------TCAGATGTAATACTCGGTA-TGGGTC--------GATGGTGCATCG------AGCGTCCTCCGCCAGCGC--TCA-GCTGTGCGATTGGTCAGTGTATGAGTCAACCCGTGGAAGAA-TCAACGCTC--GCCTCGCTTGGTCTGCATCCC-GTCTTGGGATCGGCCGGGTNNNNNNNNNN----------CCGGATGCACCGTCTTGGTGC--GTCCGGG-CCCGAGGCATTGCTCGGGTCTGATGGGG----------TTGCCTGATGGC------TATCTGCGACG--ACTATGAGCAGAGATCCCATCAGATCGTACTCTAG----------------------------------CTTCGTGAGTGTTGATTGCTTGTCTTC---------------------------------CTACCAATCACACCCTGGCTATGAAGAAAAAAACTTTC-CTAATCG-TATTCACACTGTGTGAC--CTTCGGGA--ATGCGCACACCAA----CTT--CAACGGTATCGGAGCCTCCTTCCAAACATACTTTCATTC----------------------GGGATCTGTCGTGTAGCAGCGCTGACCC---------------------CAGTTCCCACCA---------------TGCATCCTATCTTGATC-----GAGCGGTCTTAGTAGCTATGTCGTCGCTTCTGCGTGTTATCGCCTGCGAGGTGTCACACTAACTGCTTATTTTTCTTC----------------------------------ACGCTCACCACATCCCCGTCACAGAAGGGCGCTCGCCCCGTTCC---ACGGCG-AGAGCTTTCCATAACAAATAATCTTGGGGTATACGGACATTCC-GTCTTATTTGGATGGGCTCGTACAGCTTCT----------------GGCGTGGGCCATCGTCCATTGTACGGCGGAGATATACCTCTTTATACTTTACATGCACATACATACTCAT
#=GS PapTer/1-822 DE JAHXHD010000244.1:1-462 Papiliotrema terrestris strain LS28 scaffold-243, whole genome shotgun sequence
PapTer/1-822                                       ---------------------------------------------------------------------------------------------------CTCCCCCCCTCCCGCGGTTCTTAGATCCACGACCAGGAGTGACATCCCC-TCGGAGCCCCTCTCGACC--CGATA---------------------TCAGACTAACAA-TCGGTA-TGGGTC--------GACGGTGCTTTG------AGCGTCCTCCGCCAGCGC--TCA-GCTGTGCGATTGGTCAGTGTATGAGTCAACCCGTGGAAGAA-TCAACACTC--GCCTCGCCTGG-ACGCATCCC-GTCTTGGGATCGGCCGGGT---------------TCGCCTCGGGCACACCGTCTTGGTGC--GCCCGGG-CTCGAGGCATTGCTTGGGTCTGATGGG----------TTTGCCTGATGGC------TATCTGCGACG--ACTATGAGCAGAGATCCCATCAGGTCGTGCAATAG----------------------------------TTTGGTGAGTGGTTTTCTCGTGTCCC----------------------------------CCACCACATACACCCTGGCTATGAAGAAAAAAACTTT-CCTAATCG-TATTCACACTGTGTGAC--CTGCGGGA--ATGCGCACACCAA----CTT--CAACGGTATCGGAGCCTCCTTCTTAATATCACTTTTGTTT---------------------GGGATTTGTCG--CAACAGCGCTGATTC---------------------CAGATCTCTTCA---------------TGCATTCAGTAAATGTC-----GACTTGTGTTTCGTGGCTCGGTTTCATTCTCGCGCAGGATCCCCGCGAGGCCTTCTCACCACCGTCCGCCTGCGCCCATGTATCCGTGCTGACTTTGACAATCTCTGTCGC-ACTCACCCTACCTCCCCGTCACAGAAGGGCGCTCGCCCACCTCC---ACGGCG-AGAGCTTTCCATAACAAATAATCTTGGGGTAAACGAACATTCC-GTCTTATTTGGATGGGCTCGTACAGCTTCT----------------AGCGTGGGCAATCGTCCATTGTACGG-CGGAGATATACCTTGTCG-------------------------
#=GS KwoHev/1-918 DE ASQC01000174.1:20492-20979 Kwoniella heveanensis CBS 569 cont2.174, whole genome shotgun sequence
KwoHev/1-918                                       ---------------------------------------------------------------------------------------------GAATAGCCATGCCTTGCCCGCTTTTCTTTCTCAGCTTCCGTCTTGGGAGCTGGTGAGATCATAGCGGGCTTGCTTGCACCGAAATGGACGGTCCGTTCTGGATCTGTTATTTTTCGGAAGGTTGCTTAGGGGTGTTGGGGTGATCTTCTCGTTTGAATTCGCCTTTGCATCGAGCTCGGTTGGTTCTTTGTCATCAGCTTGATCTACATCCCACAGCGGAAA-------------------------------------------------------------------------------------------------------------------------------------TCTCTTCATTTCTTTGTCTTCTTCGTTTCTTTGTCTATACCTGTCCTCAGATTCTCTCGACTACACATCGACCTCATTATTGTCTTGTCATACCCAA----------TCTGTGAGTTACAACTTGATCCCCCAATGGAAACATCACGTAACACCAAATCTCCCTCTTCCCATACACCCTCCGAGCGACGATGAAACAAAAAACACCTAATCG-TATTCACACTGTGCGACTCTTTCGAGAGGATGCGCGTAAAAATTTTTCTTACAACGGTATCTGAGCTCTCTTCATACGCAACCGCCTTCTTT---------GGGGCCTCGTCATAGCATGTAGGGCGATGTCGCTGATACCTGTC-CTTCGACGA------TAGTCATT-------------------TGCAGCATCGTTTTCTCT----GAGGCTCGAACTGTTGAACCGCGTGTGCAATTGGTCTGCGCGCACGCACGCATCGAACGCCCTTGAACGTTCAGCGCTTGCTTGCTTGCTTGCTTGTTTGGTGGCCATGTCGTTCTGCCTGTCCATGTCATGCATAGAATATCCGGAACCCCAGAAGTGCAACACGACACGTTCT-ACTTCCTTCGCATCTAGTTAACAGCAAACCCGTCGTTCGATCGTGACTCTCTGGCCTTTTTCCGATGTCG-CTCTCTTCCTGACTATTTCTATCATCCTCCCAATACCCATCCAACTCGAATCATCCATATCTTTATTCCC-CCTAGAAT
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