In C. neoformans and C. deneoformans, the gene for UTP17 harbors two box C/D snoRNAs, orthologues of human SNORD96 and plant SnoR29 (snoZ107_R87).

SNORD96¶

SNORD96_intronic-boxCDsnoRNA-97nt-in-UTP17-CNB01450
Within 5^th intron of CNB01450 (CNAG_03645) for UTP17
Predicted target in 5.8S rRNA: (gtaatgtg)[a]attGcagaat
Extension of base pair interaction (within brackets) is supported by an accessory guide TACATTAC
Orthologue of human SNOR96A, SNOR96B
In C. amylolentus, C.* wingfieldii, or C. floricola two versions of SNORD96 were found.
Assignment of D’ box was not attempted by lack of phylogenetic support

> AE017342.1:436588-436684 Cryptococcus neoformans var. neoformans JEC21 chromosome 2 sequence
TTCTCGGATGAGAACTTCTTATACATTACTGTCATCCTTATTCGTACTCCTTTTTCATCGGAGGAATGTG
GCGACTTCATTCTGCAATCCTGATCCT

SnoR29¶

SnoR29_intronic-boxCDsnoRNA-nt-in-UTP17-CNB01450
Within 6^th intron of CNB01450 (CNAG_03645) for UTP17
Predicted target in 25S rRNA: ctgTtgagcttg
Orthologue of plant SnoR29-1, SnoR29-2, snoZ107_R87 or fission yeast snR88 (D' guide)
Duplicate (snoZ107-SnoR29b) is present in JEC21 at 2:1309857-1309770:-1 in intron CNB04560 for F-actin capping protein, but snoRNA from this locus seems poorly expressed.
In other Cryptococcus species multiple versions of this snoRNA are found as well.
Predicted modification as in fission yeast snR88 (see also snR88 D-box orthologue), but is shifted four nucleotides from that in plant, which uses a different D’ box (caga ).

>AE017342.1:436831-436916 Cryptococcus neoformans var. neoformans JEC21 chromosome 2 sequence
TTCCTATGATGAGCAACTTTTTTCAAGCTCAACAGTCCTACTATTACTGAGGATACCCCTCTTCTTCTTT
ATCTCTGAGGATGTTT

Image source SNORD96:

# STOCKHOLM 1.0
#=GF RW van Nues, July 2023
#=GF https://coalispr.codeberg.page/paper
Annnot/1-41                 ----------RTGATGA----------GUGUAAUG-------------------------------------------RTGATGA-----UAAGACGUUA-CTGA-------
#=GS SNORD96/1-97 DE intronic-boxCDsnoRNA-97nt-in-UTP17-CNB01450 ncrna 2:436588:436684:1 AE017342.1:436588-436684 Cryptococcus neoformans var. neoformans JEC21 chromosome 2 sequence
SNORD96/1-97                ------TTCTCGGATGAGAACTTCTTATACATTAC-----TGTCATCCTTATTCGTACTCCTTTTTCATCGGAGGAATGTGGCGACTT-CATTCTGCAATCCTGATCCT---
#=GS H99/1-95 DE CP003821.1:428365-428459 Cryptococcus neoformans var. grubii H99 chromosome 2, complete sequence
H99/1-95                    ------TTCTCGGATGAGAACTTCTTATACATTAC-----TGTCATCCTTATTCGTACTCCTTTTTCATCGGAGGAATGTGGCGACTT-TATTCTGCAATCCTGATC-----
#=GS R265/1-98 DE CP025762.1:c1334432-1334335 Cryptococcus gattii VGII R265 chromosome 4
R265/1-98                   -----TACCTCGGATGAGAACTTCTTATACATTAC-----TGTCATCCTTATTCGTACTCCTTTTTCATCGGAGGAATATGGCGACTT-CATTCTGCAATACTGATTCT---
#=GS WM276/1-98 DE CP000287.1:c1375604-1375507 Cryptococcus gattii WM276 chromosome B, complete sequence
WM276/1-98                  -----CACCTCGGATGAGAACTTCTTATACATTAC-----TGTCATCCTTATTCGTACTCCTTTTTCATCGGAGGAATATGGCGACTT-CATTCTGCAATACTGATTCT---
#=GS KwoMan/1-90 DE ASQF01000041.1:c321699-321610 Kwoniella mangroviensis CBS 8886 cont1.41, whole genome shotgun sequence
KwoMan/1-90                 -------GAAAAGATGAACAA-CTTTTCACATTCAC----TGTCATCCTTATACGGATACC-----CTTCGGGGTG--GTGGCGACTAACATTCTGCAATCCTGATTTA---
#=GS KwoHev/1-96 DE ASQC01000125.1:c86192-86097 Kwoniella heveanensis CBS 569 cont2.125, whole genome shotgun sequence
KwoHev/1-96                 -------TCTCGGATGAGTCA-TTTTTCACATTCAC---TAGTCATCCTTATACGGACCAA--CCTCCTCGGAGGA-CATGGCGACTAACATTCTGCAATACTGAACAAT--
#=GS KwoSha/1-101 DE NQVO01000042.1:c130415-130315 Kwoniella shandongensis strain CBS 12478 scaffold00042, whole genome shotgun sequence
KwoSha/1-101                -------TTCCTGATGAGCATTCATAACACATTACATTACTGTCATCCTTTTTCGGTAA---TTCTCCTCGGAGAG-TATGTCGACCAACATTCTGCAATCCTGATCTTTTC
#=GS CryAmy/1-94 DE MEKH01000001.1:520809-520892 Cryptococcus amylolentus CBS 6273 supercont2.1, whole genome shotgun sequence
CryAmy/1-94                 -------ATTCGGATGAGACT-CTTTATACATTACA------TCATCCTTATTCGTACCCC-TTTTCTTCGGGACATAATGGCGACT-ACATTCTGCAATACTGAAATCA--
#=GS CryWin/1-92 DE AWGH01000005.1:c417549-417458 Cryptococcus wingfieldii CBS 7118 supercont1.5, whole genome shotgun sequence
CryWin/1-92                 -------ATTCGGATGAGACT-CTTTATACATTACA------TCATCCTTATTCGTACCCC-TTTTCTTCGGGACATAATGGCGACT-ACATTCTGCAATACTGAAAC----
#=GS CryFlo/1-91 DE RRZH01000002.1:559607-559697 Cryptococcus floricola strain DSM 27421 chromosome 2, whole genome shotgun sequence
CryFlo/1-91                 -------ATTCGGATGAGACT-CTTTATACATTACA----TATCATCCTTATTCGTACCCC-----TATCGGGACATAATGGCGACT-ACATTCTGCAATACTGAAACC---
#=GS CryFlo/1-89 DE RRZH01000002.1:783770-783858 Cryptococcus floricola strain DSM 27421 chromosome 2, whole genome shotgun sequence
CryFlo/1-89                 ------TCTTCGGATGATACA-CTATAAACATTACA----------AACATTTCGTACCCC--TTTCTTCGGGACATCATGGCGACC-ACATTCTGCAATACTGAAACC---
#=GS CryAmy/1-96 DE MEKH01000001.1:743681-743776 Cryptococcus amylolentus CBS 6273 supercont2.1, whole genome shotgun sequence
CryAmy/1-96                 GTGACTTCTTCGGATGATACT-CTTTATACATTACA----------AAATTTTCGTACCCC--TTTCTTCGGGACATCATGGCGACC-ACATTCTGCAATACTGAAACCC--
#=GS CryWin/1-78 DE AWGH01000005.1:c198489-198412 Cryptococcus wingfieldii CBS 7118 supercont1.5, whole genome shotgun sequence
CryWin/1-78                 ----------------ATACT-CCATATACATTACA----------AAATCCTCGTACCCC--TTTCTTCGGGACATCATGGCGACC-ACATTCTGCAATACTGAAAC----
#=GS AegTau-SNORD96/1-83 DE http://snoopy.med.miyazaki-u.ac.jp/snorna_db.cgi?mode=sno_info&id=Aegilops_tauschii300594
AegTau-SNORD96/1-83         ----TGTCCGGTGATGAAAAAGCTGTTAATCATACC------ATCTTTCGGGACTGAT-----TGGTTGC--------TATGTGT----CATTCTGCAATCCTGAGTACA--
#=GS SNORD96B/1-79 DE H_sapiens300641 http://snoopy.med.miyazaki-u.ac.jp/snorna_db.cgi?mode=sno_info&id=Homo_sapiens300641
SNORD96B/1-79               ---GATCCTGGTGATGACA--------------------GACGACATTGTCAGCCAATCCCC-ATGTGGTA-------GTGAGGAC--ATGTCCTGCAGTTCTGAAGGGATT
#=GS SNORD96A/1-72 DE H_sapiens300555  5.8S rRNA http://snoopy.med.miyazaki-u.ac.jp/snorna_db.cgi?mode=sno_info&id=Homo_sapiens300555
SNORD96A/1-72               ------CCTGGTGATGACA--------------------GATGGCATTGTCAGCCAATCCCC-AAGTG-GGA------GTGAGGAC--ATGTCCTGCAATTCTGAAGG----
//

Image source SnoR29:

# STOCKHOLM 1.0
#=GF RW van Nues, July 2023
#=GF https://coalispr.codeberg.page/paper
Annot/1-34                       -----------RTGATGA---------------GUUCGAGUUGUC-CTGA---------------------RTGATGA--------------------------------CTGA----------
#=GS SnoR29/1-86 DE intronic-boxCDsnoRNA-86nt-in-CNB01450 ncrna 2:436830:436916:1 AE017342.1:436831-436916 Cryptococcus neoformans var. neoformans JEC21 chromosome 2 sequence
SnoR29/1-86                      ------TTCCTATGATGAGCAACTT----TTTTCAAGCTCAACAGTCCTACTAT---------------TACTGAGGATACCCCT-----------CTTCTTCTTTATCTCTGAGGATGTTT--
#=GS SnoR29-b/1-87 DE AE017342.1:c1309857-1309770 Cryptococcus neoformans var. neoformans JEC21 chromosome 2 sequence
SnoR29-b/1-87                    ----ATGTCCGAATATGAGCAAATC----TTTTCAAGCTCAACAGTCCTACCAT--------------AAGCTGAGGACAATT-A-----------C-TCTTCTATTTCTCTGAGGATTATT--
#=GS H99/1-82 DE CP003821.1:428606-428687 Cryptococcus neoformans var. grubii H99 chromosome 2, complete sequence
H99/1-82                         ------TTCCTATGATGAGCAATT-----TTTTCAAGCTCAACAGTCCTACTAT---------------TACTGAGGATACCCCT-----------CTTCTTCTTTATCTCTGAGGATT-----
#=GS R265/1-85 DE CP025762.1:c1334185-1334101 Cryptococcus gattii VGII R265 chromosome 4
R265/1-85                        ------TTCCTATGATGAGCAACT-----TTTTCAAGCTCAACAGTCCTATTAT---------------TACTGAGGATACCCCT-----------CTTCTTCTTTATCTCTGAGGATTTTT--
#=GS WM276/1-85 DE CP000287.1:c1375357-1375273 Cryptococcus gattii WM276 chromosome B, complete sequence
WM276/1-85                       ------TTCCTATGATGAGCAACT-----TTTTCAAGCTCAACAGTCCTAATAT---------------TACTGAGGATACCCCT-----------CTTCTTCTTTATCTCTGAGGATTTTT--
#=GS CryWin-1/1-82 DE CP034261.1:470536-470617 Cryptococcus wingfieldii strain CBS7118 chromosome 1, complete sequence
CryWin-1/1-82                    ------TTCCTATGATGAGCAATC----TTTTACAAGCTCAACAGTCCTACTAT---------------TACTGAGGATACCCCT-----------CTTCTTCTTTATCTCTGAGGAT------
#=GS CryWin-2/1-82 DE CP034261.1:470894-470975 Cryptococcus wingfieldii strain CBS7118 chromosome 1, complete sequence
CryWin-2/1-82                    ------TTCCTATGATGAGCAATTC----TTTACAAGCTCAACAGTCCTACCAT---------------TACTGAGGATACCCCT-----------CTTCTTCTTTATCTCTGAGGAT------
#=GS CryAmy/1-82 DE XM_019134412.1:129-210 Cryptococcus amylolentus CBS 6039 hypothetical protein (L202_01103), partial mRNA
CryAmy/1-82                      ------TTCCTATGATGAGCAATC----TTTTACAAGCTCAACAGTCCTACTAT---------------TACTGAGGATACCCCT-----------CTTCTTCTTTATCTCTGAGGAT------
#=GS CryAmy-1/1-82 DE MEKH01000002.1:442845-442926 Cryptococcus amylolentus CBS 6273 supercont2.2, whole genome shotgun sequence
CryAmy-1/1-82                    ------TTCCTATGATGAGCAATC----TTTTACAAGCTCAACAGTCCTACTAT---------------TACTGAGGATACCCCT-----------CTTCTTCTTTATCTCTGAGGAT------
#=GS CryAmy-2/1-82 DE MEKH01000002.1:443234-443315 Cryptococcus amylolentus CBS 6273 supercont2.2, whole genome shotgun sequence
CryAmy-2/1-82                    ------TTCCTATGATGAGCAATTC----TTTACAAGCTCAACAGTCCTACCTT---------------TACTGAGGATACCCCT-----------CTTCTTCTTTATCTCTGAGGAT------
#=GS CryAmy-3/1-80 DE MEKH01000001.1:521026-521105 Cryptococcus amylolentus CBS 6273 supercont2.1, whole genome shotgun sequence
CryAmy-3/1-80                    -------TCCTATGATGAGCAATC-----TTTACAAGCTCAACAGTCCTAATAT---------------TACTGAGGATACCCCT-----------TTTCTTCTTTATCTCTGAGGAC------
#=GS CryWin-3/1-82 DE CP034262.1:c1713976-1713895 Cryptococcus wingfieldii strain CBS7118 chromosome 2, complete sequence
CryWin-3/1-82                    ------GTCCTATGATGAGCAATC-----TTTACAAGCTCAACAGTCCTAATAT---------------TACTGAGGATACCCCT-----------CTTCTTCTTTATCTCTGAGGACT-----
#=GS CryFlo-1/1-82 DE RRZH01000001.1:c1888851-1888770 Cryptococcus floricola strain DSM 27421 chromosome 1, whole genome shotgun sequence
CryFlo-1/1-82                    ------TTCCTATGATGAGCAATC----TTTTACAAGCTCAACAGTCCTACTAT---------------TACTGAGGATACCCCT-----------CTTCTTCTTTATCTCTGAGGAT------
#=GS CryFlo-2/1-82 DE RRZH01000001.1:c1888463-1888382 Cryptococcus floricola strain DSM 27421 chromosome 1, whole genome shotgun sequence
CryFlo-2/1-82                    ------TTCCTATGATGAGCAATTC----TTTACAAGCTCAACAGTCCTACCAT---------------TACTGAGGATACCCCT-----------CTTCTTCTTTATCTCTGAGGAT------
#=GS CryFlo-3/1-80 DE RRZH01000002.1:559832-559911 Cryptococcus floricola strain DSM 27421 chromosome 2, whole genome shotgun sequence
CryFlo-3/1-80                    -------TCCTATGATGAGCAATC-----TTTACAAGCTCAACAGTCCTAATAT---------------TACTGAGGATACCCCT-----------CTTCTTCTTTATCTCTGAGGAC------
#=GS CryGC4/1-86 DE JALPCA010000381.1:2282-2367 Cryptococcus sp. GC_Crypt_4 iso00_46_414, whole genome shotgun sequence
CryGC4/1-86                      ---GGTTCCCAAAGATGATCAAA------TTTTCAAGCTCAACAGTCCTATGTT---------------TACTGAGGACAAACTT---------TTTTTCTTCT-TTTGACTGAGGGATC----
#=GS TriCor-1/1-82 DE JXYL01000003.1:c1091174-1091093 Trichosporon coremiiforme strain JCM 2938 scaffold_0003, whole genome shotgun sequence
TriCor-1/1-82                    -----GATTCGATGATGAGTAAAATCAAATTATCAAGCTCAACAGTCCTAACAT---------------TATTGCGGATACCCTA--------------CTTCTA--TTTCTGAGGCA------
#=GS TriOvo-1/1-84 DE WEIQ01000026.1:c613946-613863 Trichosporon ovoides strain 2NF903A scaffold26-size649502, whole genome shotgun sequence
TriOvo-1/1-84                    -------ATCAATGATGAGTACAATCATTTTATCAAGCTCAACAGTCCTAACCAA-------------ATGTTGCGGATACCCCA--------------CTTCTACC-TTCTGAGACAG-----
#=GS TriOvo-2/1-81 DE WEIQ01000021.1:75646-75726 Trichosporon ovoides strain 2NF903A scaffold21-size709057, whole genome shotgun sequence
TriOvo-2/1-81                    -----GATTCAATGATGAGTAAAATCAAATTATCAAGCTCAACAGTCCTATACAT---------------ACTGCGGACACCCTA--------------CTTC-AAA--TCTGAGGCA------
#=GS TriCor-2/1-85 DE JXYL01000014.1:c22119-22035 Trichosporon coremiiforme strain JCM 2938 scaffold_0014, whole genome shotgun sequence
TriCor-2/1-85                    ----GGAATCAATGATGAGTAAAATCAA-TTATCAAGCTCAACAGTCCTAACAA---------------TCTTGCGGACACCCTA--------------CTTCTA--TTTCTGAGGCATTC---
#=GS TriAsa/1-82 DE BCLT01000005.1:561033-561114 Trichosporon asahii DNA, scaffold: scaffold_5, strain: JCM 2466, whole genome shotgun sequence
TriAsa/1-82                      ------ATTCAATGATGAGTAAATCAA-TATATCAAGCTCAACAGTCCTAACA---------------ATTTTGCGGACACCCTA--------------CTTCTA--TTTCTGAGGCAAT----
#=GS CrySki/1-90 DE BCHT01000011.1:c521819-521730 Cryptococcus skinneri DNA, scaffold: scaffold_10, strain: JCM 9039, whole genome shotgun sequence
CrySki/1-90                      -----TCCCCGGTGATGAACAAA-----TTTTACAAGCTCAACAGTCTCAATATC--TTCG-----GATATATGTGGATTACACC------------TTCTTCT-TTTTTCTGAGGGGAT----
#=GS KocImp/1-83 DE NBSH01000002.1:480232-480314 Kockovaella imperatae strain NRRL Y-17943 BD324scaffold_2, whole genome shotgun sequence
KocImp/1-83                      -----CGCCCTATGATGATCAA-----TTATTTCAAGCTCAACAATCTGAACTC-----------------CTGTTGATTCATAC-------TCTTCTTCT-ATTTCT-TCTGAGGGCA-----
#=GS KwoMan-1/1-101 DE ASQF01000019.1:1003545-1003645 Kwoniella mangroviensis CBS 8886 cont1.19, whole genome shotgun sequence
KwoMan-1/1-101                   --TCCTACTCTATGATGAATAAAC---TTTTAACAAGCTCAACAGTCTCACTTTT-ACAGA----AAAGGAATGATGACTTT-AT-------TCTTCTTCTTCTTTATTTCTGAGAAAC-----
#=GS KwoHev/1-93 DE ASQC01000125.1:c85910-85818 Kwoniella heveanensis CBS 569 cont2.125, whole genome shotgun sequence
KwoHev/1-93                      ----ATCCCTTATGATGAACAAA-----TTTTACAAGCTCAACAGTCCAACATC---TTCG-----GATGCATGAGGATACTC-T-------TCTTCTTCTTCAACC-CTCTGAGGGGT-----
#=GS KwoSha-1/1-90 DE NQVO01000042.1:c130149-130060 Kwoniella shandongensis strain CBS 12478 scaffold00042, whole genome shotgun sequence
KwoSha-1/1-90                    -------TTCTATGATGAACAA-----TTTTTACAAGCTCAACAGTCCAACATC--TTAATT----GATGCATGAGGATACTC----------CTTCTTCTTCAACC-CTCTGACGGAT-----
#=GS KwoMan-2/1-96 DE ASQF01000041.1:c321435-321340 Kwoniella mangroviensis CBS 8886 cont1.41, whole genome shotgun sequence
KwoMan-2/1-96                    ---GCACCCCAAGGATGAACAAA-----TTTAACAAGCTCAACAGTCCTATATC---TTCG------GATAATGAGGATACTA-T-------TCTTCTTCTTCAACC-CTCTGAGGGGTCTG--
#=GS KwoSha-2/1-98 DE NQVO01000005.1:228713-228811 Kwoniella shandongensis strain CBS 12478 scaffold00005, whole genome shotgun sequence
KwoSha-2/1-98                    ----ATCCCCTACGATGAACAAC-----TTTTACAAGCTCAACAGTCCAATCATTCTACA----AGAATGGATGCGGATACTCC-----------TCTTCTTCAACC-CTCTGAGGGATCATC-
#=GS CryFla/1-85 DE CAUG01000432.1:59250-59334 Cryptococcus flavescens NRRL Y-50378 WGS project CAUG00000000 data, contig NODE_883_length_201895_cov_45_838108, whole genome shotgun sequence
CryFla/1-85                      -----GTATTCATGATGAACAAA---TTTTTATCAAGCTCAACAGTCCGAATACAA-------------GACTGTGGACAACC------------TTTTCTTCAACC-CTCTGATCCGA-----
#=GS TreMes/1-80 DE SDIL01000049.1:c131059-130980 Tremella mesenterica strain ATCC 28783 supercont1.49, whole genome shotgun sequence
TreMes/1-80                      ----GTGCCCCAAGATGAGACAAAA-----TATCAAGCTCAACAGTCCTACTAT---------------TGCTGCGGATACCC-------------TTTCTTCAACC-CTCTGAGGGC------
#=GS PapLau/1-86 DE JAAZPX010000029.1:c470304-470219 Papiliotrema laurentii strain IF7SW-F4 scaffold52_cov208, whole genome shotgun sequence
PapLau/1-86                      ------TTTCTATGATGAATAAAC--TTTTATTCAAGCTCAACAGTCCGAATACA-------------AAACTGTGGACACCC------------TTTTCTTCAACC-CTCTGAGATCAT----
#=GS PapTer/1-87 DE JAHXHD010000720.1:c42181-42095 Papiliotrema terrestris strain LS28 scaffold-719, whole genome shotgun sequence
PapTer/1-87                      ----AGTATCTATGATGAGCAAACA--TTTTATCAAGCTCAACAGTCCGAATACA-------------AGACTGTGGACAACC-----------TCTTTCTTCAACC-CTCTGAATCC------
#=GS TreFuc/1-86 DE BRDD01000112.1:257719-257804 Tremella fuciformis NBRC 9317 DNA, KCNB80TF.112, whole genome shotgun sequence
TreFuc/1-86                      ------GCCCGAAGATGAGCAAAACC---TTTTCAAGCTCAACAGTCTTACCCTA------------TGGGATGCTGACACCC------------TTTTCTTCAACC-CTCTGAGGGCTT----
#=GS TreYok/1-87 DE BRDC01000028.1:390580-390666 Tremella yokohamensis NBRC 100148 DNA, KCNB35TY.28, whole genome shotgun sequence
TreYok/1-87                      -----CGCCCGAAGATGAGCAAAACC---TTTTCAAGCTCAACAGTCTTACCCTA------------TGGGATGCTGACACCC------------TTTTCTTCAACC-CTCTGAGGGCTT----
#=GS NaeEnc/1-87 DE MCFC01000088.1:c28242-28156 Naematelia encephala strain 68-887.2 BCR39scaffold_88, whole genome shotgun sequence
NaeEnc/1-87                      ------GTTCAAAGATGAGCAAAAC---TTTATCAAGCTCAACAGTCCGAACACTA----------TGTGACTGTGGACACCC-------------TTTCTTCAACC-CTCTGAGAACAT----
#=GS NaeAur/1-85 DE JAKFAO010000001.1:1991768-1991852 Naematelia aurantialba strain NX-20 Contig1, whole genome shotgun sequence
NaeAur/1-85                      -------TTCAAAGATGAGCAAAAC---TTTATCAAGCTCAACAGTCCGAACACTA----------TGTGGCTGTGGACACCC-------------ATTCTTCAACC-CTCTGAGAACA-----
#=GS SchPom-snR88/1-84 DE Schizosaccharomyces_pombe snR88 http://snoopy.med.miyazaki-u.ac.jp/snorna_db.cgi?mode=sno_info&id=Schizosaccharomyces_pombe300057
SchPom-snR88/1-84                ------TATCGAGGAGGATAAAAA-TGACATGTCAAGCTCAACAATATGAAAAA------------------TTATGATTT--------TTTTCTATTTCTTCACTT--TCTGAGATGT-----
#=GS AraTha_SnoR29-1/1-106 DE Arabidopsis_thaliana SnoR29-1 http://snoopy.med.miyazaki-u.ac.jp/snorna_db.cgi?mode=sno_info&id=Arabidopsis_thaliana300058
AraTha_SnoR29-1/1-106            -------GGCAGTGATGACTCGGAAA----TTTCAAGCTCAACAGACCGGAATTAGGCGTTTCTTCCAATTTATTGGTTGAGTCGTTTCTGTGTCGATAACCCCGCTGATCTGAGCC-------
#=GS AraTha_SnoR29-2/1-115 DE Arabidopsis_thaliana SnoR29-2 http://snoopy.med.miyazaki-u.ac.jp/snorna_db.cgi?mode=sno_info&id=Arabidopsis_thaliana300057
AraTha_SnoR29-2/1-115            GAGAAATCGTGGTGATGACTTGGAAA---TATTCAAGCTCAACAGACCGTAATGTAGGATTTTTCCT--AGTGGAAAGT----CTTGCGTGTGTCGATAATCCCGCTGAACTGAGCGATTTCTC
#=GS AegTau-snoZ107_R87/1-104 DE Aegilops_tauschii snoZ107_R87 http://snoopy.med.miyazaki-u.ac.jp/snorna_db.cgi?mode=sno_info&id=Aegilops_tauschii300644
AegTau-snoZ107_R87/1-104         ----GATGGCAGTGACGATTTGCAAA---TATTCAAGCTCAACAGACCAAATCACA-GGTTTTCTCTC-AGGAGTTGATTT-------GTATGCCGATTATCCCGCTGAACCGAGCCATC----
#=GS TriDic-snoZ107_R87/1-104 DE Triticum_dicoccoides snoZ107_R87 http://snoopy.med.miyazaki-u.ac.jp/snorna_db.cgi?mode=sno_info&id=Triticum_dicoccoides300966
TriDic-snoZ107_R87/1-104         ----GATGGCAGTGACGATTTGCAAA---TATTCAAGCTCAACAGACCAAATCACA-GGTTTTCTCTC-AAGAGTTGATTT-------GTATGCCGATTATCCCGCTGAACTGAGCCATC----
#=GS TriAes-snoZ107_R87/1-104 DE Triticum_aestivum snoZ107_R87 http://snoopy.med.miyazaki-u.ac.jp/snorna_db.cgi?mode=sno_info&id=Triticum_aestivum301324
TriAes-snoZ107_R87/1-104         ----GATGGCAGTGACGATTTGCAAA---TATTCAAGCTCAACAGACCAAATCACA-GGTTTTCTCTC-AAGAGTTGATTT-------GTATGCCGATTATCCCGCTGAACTGAGCCATC----
#=GC SS                          ----((((----------------------------------------------------------------------------------------------------------))))------
//