Loci with complementarity to snRcnk02420-1_-2

snRcnk02420-1 D-guide

Target	Found @			Possible mRNA target [1]			Genes
	Motif	JEC21	H99	Orientation	Overlap	Conserved	JEC21	H99	Gene-product
GYGRTTYTGRYTRTG
GTGGTTCTGGCTGTG		4:1675332-1675346:1		as-guide	exon		CND06080
		4:1675350-1675364:1
GCGGTTCTGACTATG		5:1055351-1055365:1		as-guide	exon		CNE03710
GTGGTTCTGGTTGTG		7:68040-68054:-1		as-guide	exon		CNG00280
GTGATTTTGATTATG		9:100283-100297:1		as-guide	exon-5’UTR		CNI00400
GTGGTTCTGGTTATG		12:508377-508391:1		intergenic
GTGGTTCTGACTGTG		14:47996-48010:1		as-guide	exon		CNN00130
GYGRTTYTGRYTYTG
GCGATTTTGATTCTG		1:1217834-1217848:-1		as-guide	exon-5’CDS		CNA04580
GTGGTTTTGATTCTG	CGFDS	7:1052419-1052433:-1		target	exon-CDS	no	CNG03750	CNAG_03194	saccharopine dehydrogenase
GCGATTTTGATTTTG	AILIL	7:1331742-1331756:1		target	exon-CDS	maybe	CNG04660	CNAG_03099	chitin synthase 1
GCGATTTTGACTTTG		8:613527-613541:1		as-guide	exon
GTGATTTTGATTTTG		11:6555-6569:-1		as-guide	exon		CNK00020
		13:488969-488983:-1		as-guide	exon		CNM01645

snRcnk02420-2 D-guide

Target	Found @			Possible mRNA target [1]			Genes
	Motif	JEC21	H99	Orientation	Overlap	Conserved	JEC21	H99	Gene-product
rryGGYTYTRRYYRGTT
GATGGTTTTGATTAGTT		8:624671-624676:1		as-guide	exon		CNH01780
GACGGTTCTGGTTGGTT		9:285357-285373:1		intergenic
AACGGCTCTAACCAGTT		11:703179-703195:1		as-guide	intron		CNK02420	CNAG_13018	box CD snoRNA snRcnk02420-2
AATGGCTTTGATTGGTT	NGFD	12:666306-666318:-1		target	exon	yes	CNL06030	CNAG_05013	RNP domain-containing protein

[1] (1,2)

Orientation ‘target’ implies described RNA could base-pair to snRcnag12093 guide; ‘as-guide’ means that search sequence is antisense to described RNA, thus like the complementary snRcnag12093 guide. In this case no further analysis was done. ‘Conserved’ describes occurrence of target at same location in homologous genes in species beyond Cryptococcus that could express snRcnag12093 homologous snoRNAs (Tremellomycetes).