Commonly unmapped

Shared template [1]

% Overrepresented sequences in Unmapped.out.mate1 of mouse miRNA-seq samples by [Sarshad-2018] [2]

NCBI BLAST result (selected)

SRR6442834

SRR6442835

SRR6442837

SRR6442838

SRR6442840

SRR6442841

SRR6442843

SRR6442844

A2n_1

A2n_2

n_1

n_2

A2t_1

A2t_2

t_1

t_2

TCAGAGTTCTACAGTCCGACGATC

12.66

7.11

13.75

3.0

3.18

4.50

2.36

3.03

5’ RNA adapter

CTCTTAGATCGATGTGGTGCTCCGGAGTTCTC

9.11

M.musculus 45S pre rRNA gene, X82564

CCAGTATTAACTGTGCTGC

0.38

3.87

17.65

0.9

0.52

3.37

0.27

microRNA mir-16 precursor [3];

G.gallus, LM608825; O.garnettii, MF191538; C.jacchus,

MF191407; S.scrofa, MN753423; B.taurus, LM610409;

H.sapiens, AF480551; C.lupus, chr 22, HG994399

nnnnTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACATCA

12

0.47

0.12

3’ adapter (with fused sequence)

TAGCAGCACGT

6.83

0.27

GTTTCTGT(t/g/-)GTTGAATTACAACGATGATT

2.83

3.71

3.16

2.66

E.jubatus (Sea lion) tRNA-Glu, mitochondrion, AB300603

TTTTTTTCGGCGGTAGAAGAAAA

0.11

4.82

4.56

3.17

2.09

overlap with bacterial 16S rRNA

ATACCGGGTGCTGTAGGCTTT

1.84

0.29

1.33

2.15

0.97

1.38

0.53

0.53

R.norvegicus 5S rRNA, X83750

TCCCTGTGGTCTAGTGGTTAGGATTCGGCGCT

0.94

1.08

0.19

1.57

P.pipistrellus (small bat) chr. 12, LR862368

ACTTTTATTGGATAATAGTAATCCATTGGTCT

0.44

0.74

0.99

1.10

M.spretus (Algerian mouse), OW971698; mitochondrion;

R.rattus, OM574968; mitochondrion

GGTTCCATTGTGTAATGGTTAGCACTCTGGACT

0.13

0.14

0.43

0.43

0.92

0.81

M.meles (badger) chr. 7, OV277447;

H.glaber (naked mole rat) chr. 9, OW956841

GCCCC(-/a/c)GT(-/t/g)GCCTAATGGATAAGGCATTGGCT

0.99

1.31

P.marinus (oyster pathogen) tRNA-Arg, GG686048; GG683923


Notes